Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq3 118 2e-21
seq22 109 1e-18
seq34 107 4e-18
>seq3
Length=255871
Score = 118 bits (130), Expect = 2e-21
Identities = 149/202 (74%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || |||||||| || || |||||||| || || | || ||||| || ||||| |||
Sbjct 112781 GTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGTTTGCCA 112722
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481
|| || || || | ||||| |||||||| || ||||| ||||| ||| |||||| ||
Sbjct 112721 GCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACTAAT-TTTGCTCTT 112663
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||| || | ||| || | | ||| ||||| || || |||||||| || || || ||
Sbjct 112662 TACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCTTTCCTGTTAGAGT 112603
Query 104542 TTTTACAAATATCTGCATTTTG 104563
|| | || ||||||||||||
Sbjct 112602 CTTGATGAAAATCTGCATTTTG 112581
>seq22
Length=83673
Score = 109 bits (120), Expect = 1e-18
Identities = 484/753 (64%), Gaps = 24/753 (3%)
Strand=Plus/Plus
Query 268854 TTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCT 268913
|||| ||||||||||| | |||||| ||||| || || || || | || | ||||
Sbjct 16396 TTCTAGCGTTTTTTGCCGCTAGTGACGGTATTGTGAATGAGAACTTGGTTTCCAGGTTCA 16455
Query 268914 GTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAA 268973
|| || || || |||| |||| || ||||||||||||||||| || || |
Sbjct 16456 GTACTGACGTTGGTATCTCTGAGGCCAAGTGCTTTTACGGATTCCAGATTATGATGGAGA 16515
Query 268974 ATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAA 269033
| ||||| || || ||||||||||| | || || ||||| | | || | || |||
Sbjct 16516 ACATTCACTCTGAAATGTACAGTCTGCTTATTGACACTTACGTCAAGGAAACTAAGGAAT 16575
Query 269034 AGAAAAGACTATTTTCTTCTATGAGAACTATGGACTGTG--TGAGaaaaaaaTCTGAATG 269091
| || ||| | | || || || ||| | |||| || | | ||
Sbjct 16576 CCCAGTTCCTTTTTGATGCCATTTTCACGATTC-CTGCCATTCAGAAGAAGGCCA-AGTG 16633
Query 269092 GGCTCTGAAATGGATAA---ACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGC 269148
|||||| ||||| | |||| || || || || | |||| || || ||
Sbjct 16634 GGCTCTTCGCTGGATTACTGACGAGGAAGCTAGTTTCGCTGAGCGACTAGTCGCATTCGC 16693
Query 269149 CGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAG 269208
||||| || ||| | ||||| || || || ||||| ||||| || ||| | || || |
Sbjct 16694 AGCTGTTGAGGGTGTTTTCTTCTCAGGATCCTTTGCTGCTATTTTCTGGCTCAAAAAGCG 16753
Query 269209 AGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACA 269268
||||||||||| || || || ||| |||||| ||||| | ||||| ||| | ||
Sbjct 16754 TGGCCTTATGCCGGGTTTGACCTTCAGTAACGAGTTGATTTCTCGTGACGAGGGTCTTCA 16813
Query 269269 CTGCGACTTCGCTTGTTTATTATTTA-CTAATTATCTTTCACACAA--ACCTTCTCAAGA 269325
||| ||||||||| | | | | | | || || || | ||||| | |
Sbjct 16814 TACCGATTTCGCTTGTCTCCTTTACAGCCATTTGGAGAACAGACCAGCACCTT-TTGTTA 16872
Query 269326 TAGA--GTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAA 269383
|||| |||| | ||| || ||| | | || || | || | ||| | ||
Sbjct 16873 TAGAACGTATTC----TTACTGAAGCAGTCGATATTG-AGCAGGAGTACTTC--AGAGAT 16925
Query 269384 GCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTC 269443
||| | || || ||| ||||||||||| | | | |||| | ||| | ||||
Sbjct 16926 GCTTTGCCTGTCAGTCTACTCGGTATGAATGCCGACTTAATGAACCAGTATGTCGAGTTT 16985
Query 269444 GTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAA--AATATAACGTTGAAAATC 269501
|| |||||||| |||| || |||| || | || | || || || || | ||||
Sbjct 16986 GTGGCTGATAGACTGCTCGTAGCTTT--GGGTCAGAACAAGGTGTACAATGTCGCCAATC 17043
Query 269502 CGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGG 269561
| || ||| ||||||||||| ||||| | |||||| | ||||||||||||||||| |
Sbjct 17044 CTTTCGATTTCATGGAGAATATTTCATTGGCTGGTAAGACCAATTTCTTCGAGAAGCGTG 17103
Query 269562 TAAGTAACTATCAGAAAATGGGTGTAATGTCTA 269594
| |||| || || ||||| |||||||
Sbjct 17104 TTTCAGACTACCAAAAGGCCGGTGTTATGTCTA 17136
>seq34
Length=648589
Score = 107 bits (118), Expect = 4e-18
Identities = 148/202 (73%), Gaps = 4/202 (2%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || |||||||| || || | || || || || ||||| |||
Sbjct 446347 GTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGAGCTGTTTACCA 446406
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC-CTGAATCTTTGCTTT 104481
|| || || | | ||| || |||||||| || ||||| || || |||| |||| |||||
Sbjct 446407 GCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGA-TCTT-GCTTT 446464
Query 104482 T-ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540
| ||| || | ||| || ||| || ||||| || ||||||||||| || || | |
Sbjct 446465 TGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTTCCCGTCAACG 446524
Query 104541 TTTTTACAAATATCTGCATTTT 104562
| |||| || |||||||||||
Sbjct 446525 TCTTTATGAAAATCTGCATTTT 446546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397234568932
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |