Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3 118 2e-21 seq22 109 1e-18 seq34 107 4e-18 >seq3 Length=255871 Score = 118 bits (130), Expect = 2e-21 Identities = 149/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || |||||||| || || | || ||||| || ||||| ||| Sbjct 112781 GTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGTTTGCCA 112722 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 || || || || | ||||| |||||||| || ||||| ||||| ||| |||||| || Sbjct 112721 GCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACTAAT-TTTGCTCTT 112663 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||| || | ||| || | | ||| ||||| || || |||||||| || || || || Sbjct 112662 TACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCTTTCCTGTTAGAGT 112603 Query 104542 TTTTACAAATATCTGCATTTTG 104563 || | || |||||||||||| Sbjct 112602 CTTGATGAAAATCTGCATTTTG 112581 >seq22 Length=83673 Score = 109 bits (120), Expect = 1e-18 Identities = 484/753 (64%), Gaps = 24/753 (3%) Strand=Plus/Plus Query 268854 TTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCT 268913 |||| ||||||||||| | |||||| ||||| || || || || | || | |||| Sbjct 16396 TTCTAGCGTTTTTTGCCGCTAGTGACGGTATTGTGAATGAGAACTTGGTTTCCAGGTTCA 16455 Query 268914 GTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAA 268973 || || || || |||| |||| || ||||||||||||||||| || || | Sbjct 16456 GTACTGACGTTGGTATCTCTGAGGCCAAGTGCTTTTACGGATTCCAGATTATGATGGAGA 16515 Query 268974 ATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAA 269033 | ||||| || || ||||||||||| | || || ||||| | | || | || ||| Sbjct 16516 ACATTCACTCTGAAATGTACAGTCTGCTTATTGACACTTACGTCAAGGAAACTAAGGAAT 16575 Query 269034 AGAAAAGACTATTTTCTTCTATGAGAACTATGGACTGTG--TGAGaaaaaaaTCTGAATG 269091 | || ||| | | || || || ||| | |||| || | | || Sbjct 16576 CCCAGTTCCTTTTTGATGCCATTTTCACGATTC-CTGCCATTCAGAAGAAGGCCA-AGTG 16633 Query 269092 GGCTCTGAAATGGATAA---ACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGC 269148 |||||| ||||| | |||| || || || || | |||| || || || Sbjct 16634 GGCTCTTCGCTGGATTACTGACGAGGAAGCTAGTTTCGCTGAGCGACTAGTCGCATTCGC 16693 Query 269149 CGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAG 269208 ||||| || ||| | ||||| || || || ||||| ||||| || ||| | || || | Sbjct 16694 AGCTGTTGAGGGTGTTTTCTTCTCAGGATCCTTTGCTGCTATTTTCTGGCTCAAAAAGCG 16753 Query 269209 AGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACA 269268 ||||||||||| || || || ||| |||||| ||||| | ||||| ||| | || Sbjct 16754 TGGCCTTATGCCGGGTTTGACCTTCAGTAACGAGTTGATTTCTCGTGACGAGGGTCTTCA 16813 Query 269269 CTGCGACTTCGCTTGTTTATTATTTA-CTAATTATCTTTCACACAA--ACCTTCTCAAGA 269325 ||| ||||||||| | | | | | | || || || | ||||| | | Sbjct 16814 TACCGATTTCGCTTGTCTCCTTTACAGCCATTTGGAGAACAGACCAGCACCTT-TTGTTA 16872 Query 269326 TAGA--GTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAA 269383 |||| |||| | ||| || ||| | | || || | || | ||| | || Sbjct 16873 TAGAACGTATTC----TTACTGAAGCAGTCGATATTG-AGCAGGAGTACTTC--AGAGAT 16925 Query 269384 GCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTC 269443 ||| | || || ||| ||||||||||| | | | |||| | ||| | |||| Sbjct 16926 GCTTTGCCTGTCAGTCTACTCGGTATGAATGCCGACTTAATGAACCAGTATGTCGAGTTT 16985 Query 269444 GTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAA--AATATAACGTTGAAAATC 269501 || |||||||| |||| || |||| || | || | || || || || | |||| Sbjct 16986 GTGGCTGATAGACTGCTCGTAGCTTT--GGGTCAGAACAAGGTGTACAATGTCGCCAATC 17043 Query 269502 CGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGG 269561 | || ||| ||||||||||| ||||| | |||||| | ||||||||||||||||| | Sbjct 17044 CTTTCGATTTCATGGAGAATATTTCATTGGCTGGTAAGACCAATTTCTTCGAGAAGCGTG 17103 Query 269562 TAAGTAACTATCAGAAAATGGGTGTAATGTCTA 269594 | |||| || || ||||| ||||||| Sbjct 17104 TTTCAGACTACCAAAAGGCCGGTGTTATGTCTA 17136 >seq34 Length=648589 Score = 107 bits (118), Expect = 4e-18 Identities = 148/202 (73%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || |||||||| || || | || || || || ||||| ||| Sbjct 446347 GTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGAGCTGTTTACCA 446406 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC-CTGAATCTTTGCTTT 104481 || || || | | ||| || |||||||| || ||||| || || |||| |||| ||||| Sbjct 446407 GCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGA-TCTT-GCTTT 446464 Query 104482 T-ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540 | ||| || | ||| || ||| || ||||| || ||||||||||| || || | | Sbjct 446465 TGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTTCCCGTCAACG 446524 Query 104541 TTTTTACAAATATCTGCATTTT 104562 | |||| || ||||||||||| Sbjct 446525 TCTTTATGAAAATCTGCATTTT 446546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397234568932