Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq44 134 2e-27 seq66 127 3e-25 >seq44 Length=593535 Score = 134 bits (148), Expect = 2e-27 Identities = 190/262 (73%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | | |||| | || |||||| ||||||| |||||||| || ||||| Sbjct 447299 GCTAAGCGTCACAGAAAGATCACC-CGTGATAACCTCCAAGGTATCACCAAACCCGCTAT 447357 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| |||||||||||||||| ||||||||| | | ||| ||||||| | || Sbjct 447358 TCGTCGTTTGGCTCGTCGTGGTGGTGTCAAGCGTATTGCCTACTTGATCTATGATAATAT 447417 Query 16552 TCGTGATGT-TTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||||||| | || ||| |||||| || | | ||||||| ||| || |||| Sbjct 447418 TCGTGATATCCTTCGTGAT-TTCCTCCTTCGTATTGTTCGTGATGCTGCCCAGTACACCG 447476 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | | ||||| |||||||| ||||| | |||| |||| || || | || | || | Sbjct 447477 ATTATGCTAAGCGTAAGACCGTCACTACTTTGGACGTCGTTTACGCTCTTAAGAGACACG 447536 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||||| |||| ||||| || Sbjct 447537 GCCGTACCCTTTACGGTTTCGG 447558 >seq66 Length=396251 Score = 127 bits (140), Expect = 3e-25 Identities = 189/263 (72%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||||||||| | | |||| | || |||||| | ||||| || || || || |||| Sbjct 35929 CGCTAAGCGTCACAGAAAGATCACC-CGTGATAACCTTCAAGGTATTACAAAACCCGCTA 35987 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | ||||||||||| |||||||| || || |||||| | || ||| | ||||| | | Sbjct 35988 TTCGTCGTCTGGCCCGTCGTGGCGGTGTTAAGCGTATTGCTTATTTGATTTATGATAACA 36047 Query 16551 TTCGTGATGTT-TTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACC 16609 |||||||| || | ||| ||||| || | | ||||||| ||| ||||| Sbjct 36048 TTCGTGATATTCTCCGTGAT-TTCCTTCTTCGTATTGTGCGTGATGCTGCCCAATATACT 36106 Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669 || |||||||||||||||||||||| | ||||| | || ||||| | || | || Sbjct 36107 GACTACGCTAAACGTAAGACTGTCACTACATTGGATGTTGTTTATGCCCTCAAGAGACAT 36166 Query 16670 GGCCGTAAGATTTATGGTTTTGG 16692 ||||||| |||| ||||| || Sbjct 36167 GGCCGTACCCTTTACGGTTTCGG 36189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075127769747