Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq66 309 4e-79 seq22 183 4e-41 >seq66 Length=396251 Score = 309 bits (342), Expect = 4e-79 Identities = 1374/2150 (64%), Gaps = 63/2150 (3%) Strand=Plus/Plus Query 61983 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62042 |||| ||| | ||||| ||||| | || | ||||| | || || ||||| ||||| Sbjct 305849 TCCTGGTCAACCGTGAACTGAATAGCGGCAGCTGCGGCCTGAGTGCGCAGATAATACATA 305908 Query 62043 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACT 62101 || ||||| | ||| | ||| ||||| ||||||||||| || || || ||| | Sbjct 305909 CCAGTTTTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTACCCATAGTT 305968 Query 62102 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62161 || |||| || | ||||||| | ||||| || || ||||| | || | | || Sbjct 305969 GGGGCCTGC-ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGC 306027 Query 62162 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 62221 |||||| | || || ||||| || |||||||| | || || || | |||||| Sbjct 306028 AGCCATATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAAT 306087 Query 62222 ATCTTCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTC 62276 ||| | |||| | ||| || ||| || |||||| ||| || | |||||| Sbjct 306088 ATCCTGAGGAATCGAGGCGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTC 306145 Query 62277 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACT 62336 || || ||||| ||||| | | || | | | || |||| |||||||| Sbjct 306146 TTCATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACG 306205 Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 | ||| ||||| |||| ||| ||||| | || ||| | || ||| | || || | Sbjct 306206 ATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAA 306265 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 | ||||| | || || ||||||| ||| || ||||| ||||||||||| || | | Sbjct 306266 CATTCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGG 306325 Query 62457 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 62516 ||| | | ||| || | ||| | |||| | || ||||| | ||| | || Sbjct 306326 GAATTACGCAAACCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCA 306385 Query 62517 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGAT-----C 62571 | ||| ||| | |||| | | | || || | | | Sbjct 306386 GTAGGTGTAACGCCCCAAAGA-----TCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGC 306440 Query 62572 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 62631 || | || || || || || || || || ||| | || | || || | || Sbjct 306441 CTTCGTAAGTCTCATAAGGACCATCAACCTTAGCAATCTCGATAGAAGCTTCAACAGCTG 306500 Query 62632 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 62691 | | ||| ||||| || || |||| |||| || ||||| || || || ||||| | Sbjct 306501 CATGATATATGGTCTCAAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAAAAG 306560 Query 62692 GATAATTTAAG-AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTA 62750 | | | | || | || || || || || || || | |||||| | | | || |||||| Sbjct 306561 GC-AGTCTGAGCATAAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGTCTA 306619 Query 62751 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 62810 || | | | || || ||| ||||| | ||| || ||||| |||| ||||||| | Sbjct 306620 TGACGCATGTTGGAACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATTTGA 306679 Query 62811 TTGAGATTTCTGACAATTAC-TTTGACCACATCCTTCA---GTTTGAGAAAATCAA-ATC 62865 || | | || | | || |||||| || || | || | |||| | || | | | Sbjct 306680 TTCA-AGTTATAAGTGATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAGAAC 306738 Query 62866 GCC--CATCTATT------ACAAA--CATGTTCAAGGCAACAGATGCCAGATTACAAACG 62915 || |||| || ||||| || | | ||||| || ||||||||||| || Sbjct 306739 ACCATCATCCTTTGTCTTTACAAAGGCAGGGAGA--GCAACTGAAGCCAGATTACATACA 306796 Query 62916 GCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATA 62975 || || | || | | || | | || ||| ||| | |||| || ||||||| Sbjct 306797 GCAGTTTCCTCAGGACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGATA 306856 Query 62976 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGA 63035 || || | ||| | ||||||||||| |||| | |||||||||||| ||||| ||| Sbjct 306857 GTACCAAGATTACGCTGATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAAGGA 306916 Query 63036 GTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTAT 63094 |||| || ||| | |||| ||| | ||| || | ||| | | || |||| || || | Sbjct 306917 TTACCTGTCTCAGTTTGAGCTTCCAAAATGGCGTACCAAA-GCTTCTGAGCTTTGATGGT 306975 Query 63095 A----GATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTC 63150 | || | || | | | | ||| || |||| || | |||||| || || | Sbjct 306976 ACGACGACCTTTACC--CATACG--TTCATAACGTGTGTAAAGCTCTTCGAATTCATCAC 307031 Query 63151 CCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 63210 | |||||| | | ||||| ||||| | ||||||||||| | ||||||||| ||| Sbjct 307032 CATAAACATCAGCAAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCAG 307091 Query 63211 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 63270 ||| |||| ||||| || | ||||||||||||||||| | ||| ||||| | || | Sbjct 307092 ACTTAACTCTCTTCATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCAC 307151 Query 63271 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63330 ||| || || || || ||||| |||||||| ||| | | || |||| ||||| Sbjct 307152 GGACTTCTTCCTTACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGCC 307211 Query 63331 ACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 63390 | ||||| | || || || | | | || || |||||||| || |||||||| | || | Sbjct 307212 AGGGTTCAAGATAAATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAAC 307271 Query 63391 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTAC 63450 ||| |||||||| | || | | |||||||| ||||||||| ||| |||| || |||| Sbjct 307272 GAGCAGTGTTATTGAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTAC 307331 Query 63451 CGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCA 63510 ||| ||| || ||| ||||||| ||||| || ||||| || || || || Sbjct 307332 CGGCGATGTAAGAACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCAG 307391 Query 63511 TTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGA 63570 |||||| || | || || ||||| || ||||| || || || || || || Sbjct 307392 ATTTAGAAATAAGAGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCTT 307451 Query 63571 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 63630 ||||| || || ||||| | |||||| | | ||| || ||||| | || | Sbjct 307452 TCATGCAAACAAGGAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAAG 307511 Query 63631 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-AGCTGAG 63689 | ||||||||||| || || | || | || | | | ||| || || || | || || Sbjct 307512 TGGGAGAAGCGTGGGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTAG 307571 Query 63690 TCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC- 63748 || | | ||| || || | || || | ||| | ||| ||||| || | ||| Sbjct 307572 -GGATGTTAAAACCATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGTTCG 307630 Query 63749 --AACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 63806 ||| | || | ||||| |||||| || | ||| ||||| ||||| || Sbjct 307631 TGAACAA---CACCATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCGAAG 307687 Query 63807 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTG 63866 || |||||| || || || | |||| || | | | || || | | || || Sbjct 307688 TAATTGTATTTGAAATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGCTTC 307747 Query 63867 TTAACTATATCCATGGTGATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGAT 63924 || || | | |||| | ||| ||||| || || || || | ||| | || | Sbjct 307748 TTGACGA-CTTCATGAACCT-CTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGGGGT 307805 Query 63925 TAACATAGTTGAATAAATCCTCCATCACTTCACT-AAATAGtttttttGTTTCCTTGTGT 63983 |||||||| || ||| |||||| | || | ||| ||| || | ||| || | |||||| Sbjct 307806 TAACATAGGTGTATAGATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTGTGA 307864 Query 63984 AGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAA 64043 || || || | || || | || || |||| ||||| || |||||||| || || | Sbjct 307865 AGGTTAGAAATAGCAATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTCATA 307924 Query 64044 GTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 64093 | || || |||| ||||| || |||| | ||||| || || || || Sbjct 307925 CTAGCAGCAGTTTCAGCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 307974 >seq22 Length=83673 Score = 183 bits (202), Expect = 4e-41 Identities = 489/744 (66%), Gaps = 15/744 (2%) Strand=Plus/Minus Query 32994 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 33053 || ||||||||| || |||||||| || ||||| || ||||| ||||| || || Sbjct 17138 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 17079 Query 33054 TCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttttt 33113 || ||||||| ||||| ||||||||||| || ||||||| ||||| || | || || Sbjct 17078 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 17019 Query 33114 AAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTC 33173 ||||| | | || |||||| || || || || | ||| ||||| | || Sbjct 17018 CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTC 16959 Query 33174 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGA 33233 |||||| || | || | || || | ||| | | | | || || ||||| Sbjct 16958 GGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATC 16899 Query 33234 TACCGCATCTGTTATAATA-GATCTA-----ACGGTTTCTTCACTCGGTGGATGCAATAA 33287 || || || || | |||| | |||| | | | || ||| | | || Sbjct 16898 GACTGCTTCAGTAAGAATACGTTCTATAACAAAAGGTGCT------GGTCTGTTCTCCAA 16845 Query 33288 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTC 33347 ||| | | | | ||| ||||||||| || ||||||||||| | | ||| | || Sbjct 16844 ATGGCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTC 16785 Query 33348 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAA 33407 ||| || || | || ||||| |||||||||||||| ||||| || || | ||| || Sbjct 16784 GTTACTGAAGGTCAAACCCGGCATAAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAA 16725 Query 33408 TGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACC 33467 ||||| || ||||| | || || || || || || || | |||| ||| | ||| Sbjct 16724 GGATCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACT 16665 Query 33468 GGC--GCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 33524 || || |||| ||||| ||||||| | ||||||||| | | ||| || Sbjct 16664 AGCTTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAAT 16605 Query 33525 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGAT 33584 ||| ||||||| ||| || | | ||| ||| | || || || ||||| || || Sbjct 16604 CGTGAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAAT 16545 Query 33585 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 33644 | ||||| |||||||| || |||||||| || || ||||| |||||||| || || Sbjct 16544 AAGCAGACTGTACATTTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCA 16485 Query 33645 TCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTAT 33704 | ||||| | || || || |||| || | |||| || |||||||| || Sbjct 16484 CTTGGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAAT 16425 Query 33705 TCCGTCACTGGCTGCAAAAAACGC 33728 |||||||| || ||||||||||| Sbjct 16424 ACCGTCACTAGCGGCAAAAAACGC 16401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946584839640