Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq66 250 6e-61 seq22 114 3e-20 >seq66 Length=396251 Score = 250 bits (276), Expect = 6e-61 Identities = 1117/1739 (64%), Gaps = 58/1739 (3%) Strand=Plus/Minus Query 363433 AATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCAT 363492 ||||||| | || ||||| || ||||||||| | ||| | |||||||||||||||||| Sbjct 307644 AATGGTGTTGTTCACGAACGTCCACAGCATATGATCATGAGAGTTGCTATTGGTATCCAT 307585 Query 363493 TGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCA 363550 | | | | | || |||||||| | ||| | || | | ||| |||| Sbjct 307584 GGTTTTAACATCCCTAAGGTCATCGAAACATACGA-CTTG-ATGTCCAACAAGTACTTCA 307527 Query 363551 CGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCT 363610 | ||||| | || || |||||||||| || |||| | || || ||| ||| || | Sbjct 307526 CCCACGCTTCTCCCACTTTGTACAATGCCGGTACTCCCAGACCTCAAATGAGTTCGTGTT 307467 Query 363611 TTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTG 363670 | ||| | ||||| ||||| || ||||| || || | ||| || || || ||||| Sbjct 307466 TCCTTGTTTGCATGAAAGACGACTCTATCGATGGCATTTATGATACCCTAAAATCTTGTG 307407 Query 363671 CTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAG 363729 |||||||||| || ||| || || |||||| | | |||||| | ||||| || | Sbjct 307406 CTCTTATTTCTAAATCTGCTGGTGGTATTGGTCTTAATGTTCACAATATCCGTGCCACTG 307347 Query 363730 AACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGT 363788 |||||| ||| || || ||| || || || | |||| ||||||||||| Sbjct 307346 GTTC-TTACATCGCCGGTACTAACGG-TACATCCAACGGTATTCTTCCAATGCTTCGTGT 307289 Query 363789 GTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGC 363848 || | || ||||| | || || || |||||||| || || ||| || || || Sbjct 307288 CTTCAATAACACTGCTCGTTATGTTGATCAGGGTGGCAACAAACGTCCAGGTGCTTTCGC 307229 Query 363849 TATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACAC 363908 ||| ||||| || || |||| ||| ||||||| || | || || || || ||||| Sbjct 307228 TATTTATCTTGAACCCTGGCATGATGATGTTTTTGACTTCATCGATCTTCGTAAGAACAC 307169 Query 363909 GGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTT 363968 || || || ||| | ||||| ||||||||||| | || |||||| || ||||| || Sbjct 307168 TGGTAAGGAAGAAGTCCGTGCCCGTGATCTGTTTTTGGCTCTTTGGATTCCTGACTTATT 307109 Query 363969 TATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGG 364028 |||||| | || || | | | | ||| || | | || || ||||||| || || Sbjct 307108 CATGAAGAGAGTTAAGTCTGATGGAGAGTGGACATTGATGTGTCCCAACGAATGCCCTGG 307049 Query 364029 TCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA-GG 364087 |||| | ||||| | ||||| || | | | || ||| | |||||| || | || Sbjct 307048 TCTTGCTGATGTTTATGGTGATGAATTCGAAGAGCTTTACACACGTTATGAA-CGTATGG 306990 Query 364088 GAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGA 364147 | || | |||| || || || |||||||| |||| ||||| |||| | || | Sbjct 306989 GTAAAGGTCGTCGTACCATCAAAGCTCAGAAGCTTTGGTACGCCATTTTGGAAGCTCAAA 306930 Query 364148 TTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGC 364207 ||||||||| | || | ||| | || || ||| | ||||||||| || |||| Sbjct 306929 CTGAGACAGGTAATCCTTTCATGCTTTATAAGGATCAGGCTAACCGCAAGAGTAATCAGC 306870 Query 364208 AGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCT 364266 | |||||||| | ||| || | || | || || || |||| ||| | | Sbjct 306869 GTAATCTTGGTACTA-TCAAGAGTTCTAATTTGTGCTGTGAAATCGTTGAGTACTCTAGT 306811 Query 364267 CCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA----- 364321 || || || ||||| |||||||| || || || | || || || || ||||||| Sbjct 306810 CCTGAGGAAACTGCTGTATGTAATCTGGCTTCAGTTGCTCTCCCTGCCTTTGTAAAGACA 306751 Query 364322 ----AAGATGGTACT---TTTGACCACCAGCATCTTTATGACGT-----AACCTATCA-- 364367 | |||||| | | ||| | ||||| | |||| || || |||||| Sbjct 306750 AAGGATGATGGTGTTCTCTATGATTTCAAGCATTTGCATGAGGTTGTCAAATCTATCACT 306691 Query 364368 TGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGA 364427 | ||||| |||| | ||||||| |||||||| || || | || || || Sbjct 306690 TATAACTTG-AATC------AAATTATCGATAAGAATTACTACCCTGTCCCAGAGGCTCG 306638 Query 364428 GCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTT 364487 ||||| || ||||||||| | ||||||| | | ||||| | ||| | || || | ||| Sbjct 306637 TCGTTCCAACATGCGTCATAGACCGATTGCTTTGGGTGTTAATGGCTTGGCAGATGCTTT 306578 Query 364488 TATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTT 364547 | ||||||| || | ||||| || | || || | | || |||| |||| || Sbjct 306577 CTTTATGCTCAGACTGCCTTTTGACTCCCAAGAGGCCCAAGAGCTTAATATTCAGATATT 306518 Query 364548 TGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAA 364607 ||| || || ||| ||| || | ||||| || | || || | || Sbjct 306517 TGAGACCATATATCATGCAGCTGTTGAAGCTTCTATCGAGATTGCTAAGGTTGATGGTCC 306458 Query 364608 GTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGG--AAAATTCCAGTTTGATCTATGG 364665 || ||||| || || ||| |||| | || | |||| | ||||| ||| Sbjct 306457 TTATGAGACTTACGAAGGCAGTCCTGCTTCGGAAGGTCAGCTTTCC--TACGATCTTTGG 306400 Query 364666 AATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCAT 364725 || || || ||| | ||| |||||||||| | || | | |||||| || Sbjct 306399 GGCGTTACACCTACTGACTTGTGGGACTGGGATACTTTGAAAGCCGATCTCAAGAAGTAT 306340 Query 364726 GGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTC 364785 ||| || || ||||| | ||| || ||||| || ||||||||| | || ||| | Sbjct 306339 GGTTTGCGTAATTCCCTTCTAGTAGCACCTATGCCTACTGCTTCTACTTCTCAAATCTTA 306280 Query 364786 GGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTT-TATTCACGCCGGGTTCTTTC 364844 || |||| || || ||||| || || || ||| ||| || || | | || | | Sbjct 306279 GGCTACAATGAATGTTTCGAGCCTTTCAC-CTCAAACTTCTACTCTAGAAGAGTCTTGGC 306221 Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904 || ||||| | | |||||| || || ||||||| ||| || || || || Sbjct 306220 TGGTGAATTCCAAATCGTTAATCCCTATCTTCTCAAGGACCTTGTTGATATGGGTCTCTG 306161 Query 364905 GGGTGACAGCATGAAGAACTATA-TCATCGCCGCTAATGGTTCTGTGCAGAACAT-TCCA 364962 | || |||||||| || | | || || | ||||||| | | |||| || Sbjct 306160 GAACGATGATATGAAGAA-TAGATTGATTGCAAGTGGTGGTTCTATTAAAGACATCGCCT 306102 Query 364963 GGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGA--A 365020 || |||| | ||| | ||| | | ||||| ||||| ||||||| || | || | Sbjct 306101 CGA-TTCCTCAGGATATTAAGGATCTATACAAGACCGTCTGGGAAA--TCAGTCAGAAGA 306045 Query 365021 CTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACG 365080 | | ||||||||||| |||| ||| ||| |||| || ||||| ||| || || Sbjct 306044 CCATTATTGATATGGCTGCCGCTCGTGGTCCTTTCATTGACCAGAGTCAGAGTTTGAATA 305985 Query 365081 TATTCATGACTCAG---CCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGG 365136 | | |||| ||| ||||| | ||||| || |||||||||||||| ||| Sbjct 305984 TTTACATG---CAGGCCCCAACTATGGGTAAGCTCACTAGTATGCATTTCTACGGTTGG 305929 >seq22 Length=83673 Score = 114 bits (126), Expect = 3e-20 Identities = 357/548 (65%), Gaps = 16/548 (3%) Strand=Plus/Plus Query 22411 GCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGA-- 22468 || ||| ||| |||| | ||| |||| ||||| | ||||| || ||||| | Sbjct 16593 GCCATTTTCACGATTCCTGCCATTCAGAAGAAGGCCAAGTGGGCTCTTCGCTGGATTACT 16652 Query 22469 -ACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTC 22527 || | ||| | ||||| || || || | ||||| || | ||||| || ||||| Sbjct 16653 GACGAGGAAGCTAGTTTCGCTGAGCGACTAGTCGCATTCGCAGCTGTTGAGGGTGTTTTC 16712 Query 22528 TTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTA 22587 || || ||| | ||| ||| || || ||||| ||||| |||| ||||||||||| | Sbjct 16713 TTCTCAGGATCCTTTGCTGCTATTTTCTGGCTCAAAAAGCGTGGCCTTATGCCGGGTTTG 16772 Query 22588 ACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATG 22647 || || || ||||| ||| || || |||||||||||||||||||| || ||| | Sbjct 16773 ACCTTCAGTAACGAGTTGATTTCTCGTGACGAGGGTCTTCATACCGATTTCGCTTGTCTC 16832 Query 22648 CTATATCGGAAT---CATATCATTCATAAACTTCCATATGAAACTGTACTTGATATTATT 22704 || || | || | | || | | || | || | | || |||| || Sbjct 16833 CTTTACAGCCATTTGGAGAACAGAC---CAGCACCTTTTGTTATAGAAC---GTATTCTT 16886 Query 22705 ACAAATGCAGTTGAACTTGA--ACGTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCA 22762 || | ||||| || |||| | | || | | | || || || || || ||||| Sbjct 16887 ACTGAAGCAGTCGATATTGAGCAGGAGTACT--TCAGAGATGCTTTGCCTGTCAGTCTAC 16944 Query 22763 TTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAA 22822 | ||||| |||||||| | ||||| ||| | | ||||| || ||| | || | Sbjct 16945 TCGGTATGAATGCCGACTTAATGAACCAGTATGTCGAGTTTGTGGCTGATAGACTGCTCG 17004 Query 22823 TTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTA 22882 | | | ||| | ||| || || |||| ||||| || || | ||||| || Sbjct 17005 TAGCTTTGGGTCAGAACAAGGTGTACAATGTCGCCAATCCTTTCGATTTCATGGAGAATA 17064 Query 22883 TTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAG 22942 ||||| | | || ||||||||||||||||| || | ||| || |||||||| || | Sbjct 17065 TTTCATTGGCTGGTAAGACCAATTTCTTCGAGAAGCGTGTTTCAGACTACCAAAAGGCCG 17124 Query 22943 GTGTTATG 22950 |||||||| Sbjct 17125 GTGTTATG 17132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352280761778