Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq66 333 3e-86 seq22 196 6e-45 >seq66 Length=396251 Score = 333 bits (368), Expect = 3e-86 Identities = 1379/2150 (64%), Gaps = 63/2150 (3%) Strand=Plus/Plus Query 61838 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 61897 |||| ||| | ||||| ||||| | || | ||||| | || || ||||| ||||| Sbjct 305849 TCCTGGTCAACCGTGAACTGAATAGCGGCAGCTGCGGCCTGAGTGCGCAGATAATACATA 305908 Query 61898 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACT 61956 || ||||| | ||| | ||| ||||| ||||||||||| || || || ||| | Sbjct 305909 CCAGTTTTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTACCCATAGTT 305968 Query 61957 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62016 || |||| || | ||||||| | ||||| || || ||||| | || | | || Sbjct 305969 GGGGCCTGC-ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGC 306027 Query 62017 AGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 62076 |||||| | ||||| ||||| || |||||||| | || || || | |||||| Sbjct 306028 AGCCATATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAAT 306087 Query 62077 ATCTTCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTC 62131 ||| | |||| | ||| || ||| || |||||| ||| || | |||||| Sbjct 306088 ATCCTGAGGAATCGAGGCGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTC 306145 Query 62132 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACT 62191 || || ||||| ||||| | | || | | | || |||| |||||||| Sbjct 306146 TTCATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACG 306205 Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251 | ||| ||||| |||| ||| ||||| | || ||| | || ||| | || || | | Sbjct 306206 ATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAA 306265 Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311 | ||||| | || || ||||||| ||| || ||||| ||||||||||| || | | Sbjct 306266 CATTCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGG 306325 Query 62312 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 62371 ||| | | ||| || | ||| | |||| | || ||||| | ||| | || Sbjct 306326 GAATTACGCAAACCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCA 306385 Query 62372 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGAT-----C 62426 | ||| ||| | |||| | | | || || | | | Sbjct 306386 GTAGGTGTAACGCCCCAAAGA-----TCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGC 306440 Query 62427 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 62486 || | || || || || || || || || ||| | || | || || | || Sbjct 306441 CTTCGTAAGTCTCATAAGGACCATCAACCTTAGCAATCTCGATAGAAGCTTCAACAGCTG 306500 Query 62487 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATG 62546 | | ||| ||||| || || |||| |||| || ||||| || || || ||||| | Sbjct 306501 CATGATATATGGTCTCAAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAAAAG 306560 Query 62547 GATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTA 62605 | | | | || | || || || ||||| || || | |||||| | | | || |||||| Sbjct 306561 GC-AGTCTGAGCATAAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGTCTA 306619 Query 62606 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 62665 || | | | || || ||| ||||| | ||| || ||||| |||| ||||||| | Sbjct 306620 TGACGCATGTTGGAACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATTTGA 306679 Query 62666 TTGAGATTTCTGACAATTAC-TTTGACCACATCCTTCA---GTTTGAGAAAATCAA-ATC 62720 || | | || | | || |||||| || || | || | |||| | || | | | Sbjct 306680 TTCA-AGTTATAAGTGATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAGAAC 306738 Query 62721 GCC--CATCTATT------ACAAA--CATGTTCAATGCAACAGATGCCAGATTACAAACG 62770 || |||| || ||||| || | | ||||| || ||||||||||| || Sbjct 306739 ACCATCATCCTTTGTCTTTACAAAGGCAGGGAGA--GCAACTGAAGCCAGATTACATACA 306796 Query 62771 GCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATG 62830 || || | || | | || | | || ||| ||| | |||| || |||||| Sbjct 306797 GCAGTTTCCTCAGGACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGATA 306856 Query 62831 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGA 62890 || || | ||| | ||||||||||| |||| | |||||||||||| ||||| ||| Sbjct 306857 GTACCAAGATTACGCTGATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAAGGA 306916 Query 62891 GTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTAT 62949 |||| || ||| | |||| ||| | ||| || | ||| | | || |||| || || | Sbjct 306917 TTACCTGTCTCAGTTTGAGCTTCCAAAATGGCGTACCAAA-GCTTCTGAGCTTTGATGGT 306975 Query 62950 AGATTTGTATCTCTTTTCTCTTTCGT--ATA--GTGTATACAATCGTTCGAACTCGTCTC 63005 | | |||| | | | ||| ||| |||| || | |||||| || || | Sbjct 306976 AC----GACGACCTTTACCCATACGTTCATAACGTGTGTAAAGCTCTTCGAATTCATCAC 307031 Query 63006 CCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 63065 | |||||| | || ||||| ||||| | ||||||||||| | ||||||||| ||| Sbjct 307032 CATAAACATCAGCAAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCAG 307091 Query 63066 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 63125 ||| |||| ||||| || | ||||||||||||||||| | ||| ||||| | || | Sbjct 307092 ACTTAACTCTCTTCATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCAC 307151 Query 63126 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63185 ||| || || || || ||||| |||||||| ||| | | || |||| ||||| Sbjct 307152 GGACTTCTTCCTTACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGCC 307211 Query 63186 ACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 63245 | ||||| | || || || | | | || || |||||||| || |||||||| | || | Sbjct 307212 AGGGTTCAAGATAAATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAAC 307271 Query 63246 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCC 63305 ||| |||||||| | || | | |||||||| |||||| ||||||||||| || || | Sbjct 307272 GAGCAGTGTTATTGAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTAC 307331 Query 63306 CTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCA 63365 | | ||| || ||| ||||||| ||||| || ||||| || || || || Sbjct 307332 CGGCGATGTAAGAACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCAG 307391 Query 63366 TTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCA 63425 |||||| || | || || ||||| |||||||| ||||| || ||| || || Sbjct 307392 ATTTAGAAATAAGAGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCTT 307451 Query 63426 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 63485 ||||| || || ||||| | |||||| | | ||| || ||||| | || | Sbjct 307452 TCATGCAAACAAGGAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAAG 307511 Query 63486 TAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-AGCTGAG 63544 | ||||||||||| || || | || | || | | | ||| || || || | || || Sbjct 307512 TGGGAGAAGCGTGGGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTAG 307571 Query 63545 TCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC- 63603 || | | ||| || || | || || | ||| | ||| ||||| || | ||| Sbjct 307572 -GGATGTTAAAACCATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGTTCG 307630 Query 63604 --AACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 63661 ||| | || | ||||| |||||| || | ||| ||||| ||||| || Sbjct 307631 TGAACAA---CACCATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCGAAG 307687 Query 63662 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTG 63721 || |||||| || || || | |||| || | | | || || | | || || Sbjct 307688 TAATTGTATTTGAAATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGCTTC 307747 Query 63722 TTAACTACATCCATGGTAATACTT--GAAATAATAGGAAAATGTTTCCCATTTTTAGGAT 63779 || || || | ||| | | ||| ||||| ||||| | || | ||| | || | Sbjct 307748 TTGACGAC-TTCAT-GAACCTCTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGGGGT 307805 Query 63780 TGACATAGTTGAATAAATCCTCCATCACTTCACT-AAATAGtttttttGTTTCTTTGTGT 63838 | |||||| || ||| |||||| | || | ||| ||| || | ||| || | ||||| Sbjct 307806 TAACATAGGTGTATAGATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTGTGA 307864 Query 63839 AGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAA 63898 || || || | || || | || || |||| ||||| || |||||||| || || | Sbjct 307865 AGGTTAGAAATAGCAATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTCATA 307924 Query 63899 GTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACC 63948 | || || |||| ||||| || |||| | ||||| || || ||||| Sbjct 307925 CTAGCAGCAGTTTCAGCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 307974 >seq22 Length=83673 Score = 196 bits (216), Expect = 6e-45 Identities = 490/741 (66%), Gaps = 9/741 (1%) Strand=Plus/Minus Query 32351 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 32410 || ||||||||| || |||||||| || ||||| || ||||| ||||| || || Sbjct 17138 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 17079 Query 32411 ACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAttttttt 32470 ||| | ||||| ||||| |||||||||||||| ||||||| ||||| || | || || Sbjct 17078 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 17019 Query 32471 AAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTC 32530 ||||| | | || |||||| || ||||| || | ||| ||||| | || Sbjct 17018 CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTC 16959 Query 32531 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 32590 |||||| || | || | || || | ||| | | | | || || |||||| Sbjct 16958 GGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATC 16899 Query 32591 GACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGA---TACAATAAATG 32647 ||| || || || | |||| | | || | | | | ||| | | ||||| Sbjct 16898 GACTGCTTCAGTAAGAATA---CGTTCTATAACAAAAGGTGCTGGTCTGTTCTCCAAATG 16842 Query 32648 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 32707 | | | | ||| ||||||||| || ||||||||||| | | ||| || ||||| Sbjct 16841 GCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCGTT 16782 Query 32708 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 32767 || || | || ||||| |||||||||||||| ||||| || || | ||||| || Sbjct 16781 ACTGAAGGTCAAACCCGGCATAAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAAGGA 16722 Query 32768 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 32827 ||| || ||||||| || || || || || || || | |||| ||| | ||| || Sbjct 16721 TCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACTAGC 16662 Query 32828 --GCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 32884 || |||| ||||| ||||||| | ||||||||| | | ||| || || Sbjct 16661 TTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAATCGT 16602 Query 32885 CTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAA 32944 || |||| ||| || | | ||| ||| | || || || || || ||||| | Sbjct 16601 GAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATAAG 16542 Query 32945 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCT 33004 ||||| |||||||| || |||||||| || || || || |||||||| ||||| | Sbjct 16541 CAGACTGTACATTTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCACTT 16482 Query 33005 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 33064 ||||| | || || || |||| || | | || || |||||||| || || Sbjct 16481 GGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATACC 16422 Query 33065 GTCACTGGCTGCAAAAAACGC 33085 |||||| || ||||||||||| Sbjct 16421 GTCACTAGCGGCAAAAAACGC 16401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631374288400