Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq23 125 6e-24 seq3 123 2e-23 seq66 86.0 5e-12 >seq23 Length=679897 Score = 125 bits (138), Expect = 6e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || ||||| || ||| | || || || ||||| || || |||||||||||||||| Sbjct 615108 GTTAACATGCAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAG 615049 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 | | |||||| | || | | | || || || |||||||| |||||||| || Sbjct 615048 TCTAATGATACCATCGAAGCTGTGAAGAGCAAGATCAGCGACAAGGAAGGTATTCCTCCT 614989 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || || |||||||| || || ||||| ||| | ||||| |||||| | ||||| Sbjct 614988 GACCAGCAGCGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAG 614929 Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| || || || ||||| | ||||| ||| | || ||||| || ||| Sbjct 614928 TATAACATCCAGAAGGAGTCCACTCTGCATTTGGTTCTCCGTTTGCGTGGTGGT 614875 >seq3 Length=255871 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| ||||| | || ||| |||| || || || |||| || || || ||| || Sbjct 112582 AAAATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCC 112641 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | || | | || |||||| || ||||| |||||||| || || Sbjct 112642 AATGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGAC 112701 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||||||||||| || || ||||||||| | || ||| ||||||| |||| || ||| Sbjct 112702 CAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTAC 112761 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTT 22428 ||||| || ||||| ||||| | || || ||| Sbjct 112762 AACATCCAGAAAGAGTCCACTCTTCACTTGGTT 112794 >seq66 Length=396251 Score = 86.0 bits (94), Expect = 5e-12 Identities = 269/414 (65%), Gaps = 11/414 (3%) Strand=Plus/Plus Query 129985 GGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACC 130044 ||||||||||| ||||| |||||| | | |||| ||||| || || || || | | Sbjct 307064 GGACACATCAATGTCCACTCTCCATCAGACTTAACTCTCTTCATGAATAAGTCAGGAATC 307123 Query 130045 CACAGGGCGTACAACAAATCTCGCGCTT----TTCTATCCTCGGCACCCATGTTACGTTT 130100 || || || | |||| ||| || || |||| |||| || | ||||| Sbjct 307124 CAAAGAGCCAAAAACAGATCACGGGCACGGACTTCT-TCCTTACCAGTGTTCTTACGA-- 307180 Query 130101 CAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCC 130160 || || | ||| || ||| || | ||||| ||||||| |||||| || | || || Sbjct 307181 -AGATCGATGAAGTCAAAAACATCATCATGCCAGGGTTCAAGATAAATAGCGAAAGCACC 307239 Query 130161 CTTCCGTTTG---CCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACAT 130217 |||||| || || || ||||| | || | | || ||| |||| || | ||| Sbjct 307240 TGGACGTTTGTTGCCACCCTGATCAACATAACGAGCAGTGTTATTGAAGACACGAAGCAT 307299 Query 130218 TGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAAC 130277 || | ||||||| || ||||| || | | ||| || ||| || || | Sbjct 307300 TGGAAGAATACCGTTGGATGTACCGTTAGTACCGGCGATGTAAGAACCAGTGGCACGGAT 307359 Query 130278 GTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAATCGCGTAG 130337 || ||||| | ||||| || || || || |||| || || | || ||| ||| Sbjct 307360 ATTGTGAACATTAAGACCAATACCACCAGCAGATTTAGAAATAAGAGCACAAGATTTTAG 307419 Query 130338 CGTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACACGA 130391 || |||||||||||| ||||| ||| ||||| ||| | ||||||||||| Sbjct 307420 GGTATCATAAATGCCATCGATAGAGTCGTCTTTCATGCAAACAAGGAAACACGA 307473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727595880635