Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq23 125 6e-24
seq3 123 2e-23
seq66 86.0 5e-12
>seq23
Length=679897
Score = 125 bits (138), Expect = 6e-24
Identities = 168/234 (72%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
|| || ||||| || ||| | || || || ||||| || || ||||||||||||||||
Sbjct 615108 GTTAACATGCAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAG 615049
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
| | |||||| | || | | | || || || |||||||| |||||||| ||
Sbjct 615048 TCTAATGATACCATCGAAGCTGTGAAGAGCAAGATCAGCGACAAGGAAGGTATTCCTCCT 614989
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
|| || || |||||||| || || ||||| ||| | ||||| |||||| | |||||
Sbjct 614988 GACCAGCAGCGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAG 614929
Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || || || ||||| | ||||| ||| | || ||||| || |||
Sbjct 614928 TATAACATCCAGAAGGAGTCCACTCTGCATTTGGTTCTCCGTTTGCGTGGTGGT 614875
>seq3
Length=255871
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| ||||| | || ||| |||| || || || |||| || || || ||| ||
Sbjct 112582 AAAATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCC 112641
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || ||| | || | | || |||||| || ||||| |||||||| || ||
Sbjct 112642 AATGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGAC 112701
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||||||||||| || || ||||||||| | || ||| ||||||| |||| || |||
Sbjct 112702 CAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTAC 112761
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTT 22428
||||| || ||||| ||||| | || || |||
Sbjct 112762 AACATCCAGAAAGAGTCCACTCTTCACTTGGTT 112794
>seq66
Length=396251
Score = 86.0 bits (94), Expect = 5e-12
Identities = 269/414 (65%), Gaps = 11/414 (3%)
Strand=Plus/Plus
Query 129985 GGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACC 130044
||||||||||| ||||| |||||| | | |||| ||||| || || || || | |
Sbjct 307064 GGACACATCAATGTCCACTCTCCATCAGACTTAACTCTCTTCATGAATAAGTCAGGAATC 307123
Query 130045 CACAGGGCGTACAACAAATCTCGCGCTT----TTCTATCCTCGGCACCCATGTTACGTTT 130100
|| || || | |||| ||| || || |||| |||| || | |||||
Sbjct 307124 CAAAGAGCCAAAAACAGATCACGGGCACGGACTTCT-TCCTTACCAGTGTTCTTACGA-- 307180
Query 130101 CAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCC 130160
|| || | ||| || ||| || | ||||| ||||||| |||||| || | || ||
Sbjct 307181 -AGATCGATGAAGTCAAAAACATCATCATGCCAGGGTTCAAGATAAATAGCGAAAGCACC 307239
Query 130161 CTTCCGTTTG---CCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACAT 130217
|||||| || || || ||||| | || | | || ||| |||| || | |||
Sbjct 307240 TGGACGTTTGTTGCCACCCTGATCAACATAACGAGCAGTGTTATTGAAGACACGAAGCAT 307299
Query 130218 TGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAAC 130277
|| | ||||||| || ||||| || | | ||| || ||| || || |
Sbjct 307300 TGGAAGAATACCGTTGGATGTACCGTTAGTACCGGCGATGTAAGAACCAGTGGCACGGAT 307359
Query 130278 GTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAATCGCGTAG 130337
|| ||||| | ||||| || || || || |||| || || | || ||| |||
Sbjct 307360 ATTGTGAACATTAAGACCAATACCACCAGCAGATTTAGAAATAAGAGCACAAGATTTTAG 307419
Query 130338 CGTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACACGA 130391
|| |||||||||||| ||||| ||| ||||| ||| | |||||||||||
Sbjct 307420 GGTATCATAAATGCCATCGATAGAGTCGTCTTTCATGCAAACAAGGAAACACGA 307473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727595880635
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |