Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq3 179 7e-40
seq23 134 3e-26
seq34 127 4e-24
seq9 84.2 4e-11
>seq3
Length=255871
Score = 179 bits (198), Expect = 7e-40
Identities = 181/233 (78%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
||| || ||||| || | |||||||| || ||||||||||| |||||||| || || ||
Sbjct 112812 TCCGCCACGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGA 112753
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
||| || | |||||||| | ||| || || ||||| || || | ||||||||| || ||
Sbjct 112752 GAGGGTGCGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGG 112693
Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
||| |||||||| || ||| ||||| ||| |||||||| |||||||| ||||| |
Sbjct 112692 AATACCTTCCTTATCACTAAT-TTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAA 112634
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
| || | |||||| || ||||| || || ||||||| ||| ||||||||| ||
Sbjct 112633 CCTCGAGGGTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCATTTTG 112581
>seq23
Length=679897
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
||||| || || |||||||| || ||||||||||| ||||| || || | || || ||
Sbjct 614894 ACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTCCTCA 614953
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| || ||||| || || | || ||||| || ||||| |||||||||||
Sbjct 614954 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTG 615013
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||| || || |||||||| || || || ||||| | ||||| || |||
Sbjct 615014 ATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGTCTTT 615073
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | |||||||| || ||||||||
Sbjct 615074 CCGGTCAAGGTCTTGATAAAGATCTGCAT 615102
>seq34
Length=648589
Score = 127 bits (140), Expect = 4e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| | |||||||| || |||||||| || || ||
Sbjct 446317 CCACCACGGAGACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 446376
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||| || || ||||| || | | || ||||| || |||
Sbjct 446377 AGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGA 446436
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||||||||| ||||| ||||| |||||||||||||| || || ||
Sbjct 446437 ATACCTTCCTTGTCGCTGATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACC 446496
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| | ||| || || |||||||| | ||||| | ||| |||||||||
Sbjct 446497 TCGAGGGTAATAGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCATT 446544
>seq9
Length=187991
Score = 84.2 bits (92), Expect = 4e-11
Identities = 152/220 (69%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 224437 GAATTCAGTGCTGTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGA 224496
||| |||| | ||||| ||| | || ||||| || |||| || | || ||
Sbjct 164773 GAACTCAGCGGAGTGAGTAATGATAACGACACCACCCTCGAACTTCTTGATAGCACCAGA 164832
Query 224497 AAGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTG 224556
|| || || | ||| || |||||||| | || || |||||||| |||| |||| ||
Sbjct 164833 GAGAGCACCCAACGAATCACGGTCAAGATAATTAGTAGGCTCATCGAGGACAATAAGATG 164892
Query 224557 GGGGCACTGCCACAGGGCTG-CACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGC 224615
||| | |||||| || | | || | | || ||||| ||||||||||| || || || |
Sbjct 164893 GGGTCTCTGCCA-AGTACAGGCAGCCAAGACAAGCTTGACCTTCTGACCACCGGAAAGAC 164951
Query 224616 CGCGGATCCGCGAGTGAGTCGTGAATTCGGGGTCAAGACC 224655
| ||||| || ||||||| || || || ||||||||
Sbjct 164952 CACGGATACGAGAGTGAGAAACCAACTCAGGATCAAGACC 164991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621489897880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |