Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq34 107 2e-18 seq23 98.7 1e-15 >seq34 Length=648589 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| || | ||| |||||| || || ||||| |||| || || || | Sbjct 446328 ACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCC 446387 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||| ||||||||||| || | ||||||||||| | || | | ||||| Sbjct 446388 ATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTT 446447 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| |||| || ||||| | | | | ||||| | || || || |||| || || Sbjct 446448 GTCGCTGATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAAT 446507 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTCAC 42214 || || ||||| | |||||||| || || ||||||||||| Sbjct 446508 AGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCATTTTCAC 446549 >seq23 Length=679897 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 41991 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 42050 ||||| | |||||||||| ||| |||||| || || || || || | ||||| || Sbjct 614885 AAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGG 614944 Query 42051 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCC 42110 |||| || |||||||| |||||||| || || ||||||||||| | || | | ||| Sbjct 614945 CCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCC 615004 Query 42111 TTGTCCATGATTTT--TTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCG 42168 ||||| |||| || | | ||| ||| | || || | || ||||| || | | Sbjct 615005 TTGTCGCTGATCTTGCTCTTCACAGCTTCG--ATGGTATCATTAGACTCCACTTCAAGAG 615062 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTCACG 42215 |||| || || || || | ||||| | |||||| ||||| || ||| Sbjct 615063 TGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTTAACG 615109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212263577360