Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq3 109 4e-19
seq23 95.1 9e-15
seq34 89.7 4e-13
>seq3
Length=255871
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026
||| || ||||| || || ||||| || |||||||| || ||| | | | |||||
Sbjct 112794 AACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTC 112735
Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086
| |||||||||||| | || | ||| |||||||| ||||| |||||||| ||||
Sbjct 112734 AAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACT 112675
Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146
||||||||| ||||| || || || || | ||| || || | ||| || || ||
Sbjct 112674 AATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCTT 112615
Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
||||| ||||| || | ||||| ||||| ||
Sbjct 112614 TCCTGTTAGAGTCTTGATGAAAATCTGCATTTT 112582
>seq23
Length=679897
Score = 95.1 bits (104), Expect = 9e-15
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| ||||| | | ||| ||||| || || || || || || ||||| || |||
Sbjct 614876 CCACCACGCAAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAA 614935
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
||| | | |||| || | || ||||||||| | || | |||||| ||||| |||
Sbjct 614936 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 614995
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| | || ||||| || ||| ||| || ||||| || || ||
Sbjct 614996 ATACCTTCCTTGTCGCTGATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACT 615055
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| | || || || || || |||| || || | ||| || ||||| ||
Sbjct 615056 TCAAGAGTGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTT 615105
>seq34
Length=648589
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || |||| || || || || || |||||||| || || | | | || ||
Sbjct 446335 ACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCG 446394
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| ||||| |||||| | ||||||||||| ||||| ||||| ||||||||||| |
Sbjct 446395 AGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTG 446454
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| |||||||| ||| || || || || || || || || | |||||| || ||
Sbjct 446455 ATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTT 446514
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| |||| || |||| ||||| ||||| ||
Sbjct 446515 CCCGTCAACGTCTTTATGAAAATCTGCATTTT 446546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357391655898515
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |