Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq3 109 4e-19 seq23 95.1 9e-15 seq34 89.7 4e-13 >seq3 Length=255871 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || ||||| || || ||||| || |||||||| || ||| | | | ||||| Sbjct 112794 AACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTC 112735 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | |||||||||||| | || | ||| |||||||| ||||| |||||||| |||| Sbjct 112734 AAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACT 112675 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||||||||| ||||| || || || || | ||| || || | ||| || || || Sbjct 112674 AATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCTT 112615 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 ||||| ||||| || | ||||| ||||| || Sbjct 112614 TCCTGTTAGAGTCTTGATGAAAATCTGCATTTT 112582 >seq23 Length=679897 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| ||||| | | ||| ||||| || || || || || || ||||| || ||| Sbjct 614876 CCACCACGCAAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAA 614935 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | |||| || | || ||||||||| | || | |||||| ||||| ||| Sbjct 614936 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 614995 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| | || ||||| || ||| ||| || ||||| || || || Sbjct 614996 ATACCTTCCTTGTCGCTGATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACT 615055 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | || || || || || |||| || || | ||| || ||||| || Sbjct 615056 TCAAGAGTGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTT 615105 >seq34 Length=648589 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || |||| || || || || || |||||||| || || | | | || || Sbjct 446335 ACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCG 446394 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||||| |||||| | ||||||||||| ||||| ||||| ||||||||||| | Sbjct 446395 AGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTG 446454 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || |||||||| ||| || || || || || || || || | |||||| || || Sbjct 446455 ATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTT 446514 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || |||| || |||| ||||| ||||| || Sbjct 446515 CCCGTCAACGTCTTTATGAAAATCTGCATTTT 446546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391655898515