Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 111 4e-19
seq23 98.7 2e-15
seq34 93.3 1e-13
>seq3
Length=255871
Score = 111 bits (122), Expect = 4e-19
Identities = 161/227 (71%), Gaps = 3/227 (1%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | ||| ||||| ||||| || |||| ||||||||||| | ||
Sbjct 112805 CGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTG 112746
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||| ||||| || || |||||||| ||||| || ||||| ||| ||| |||
Sbjct 112745 CGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCT 112686
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || ||| || ||| |||| || | |||||| | | ||| || || |
Sbjct 112685 TCCTTATCACTAATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGG 112626
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||||| ||||| || || ||||| || | ||||| || ||||||
Sbjct 112625 GTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTG---CATTTT 112582
>seq23
Length=679897
Score = 98.7 bits (108), Expect = 2e-15
Identities = 144/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|| ||||| |||||||| |||| ||| || || | | ||| | || || || ||||||
Sbjct 614900 TGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTCCTCAAGCTGC 614959
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT-CTCGCTCCTGAATCTT 199545
|| || |||||||| |||||||||||||| ||| ||| |||| || | ||| |||||
Sbjct 614960 TTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTG-ATCTT 615018
Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
|||||| | ||||| ||| || | | || || || | ||||| ||||| || ||
Sbjct 615019 GCTCTTCACAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGTCTTTCCGGT 615078
Query 199606 GAGAGTTTTCACAAAAATTTG 199626
| || || | ||| || ||
Sbjct 615079 CAAGGTCTTGATAAAGATCTG 615099
>seq34
Length=648589
Score = 93.3 bits (102), Expect = 1e-13
Identities = 154/219 (70%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| | ||| |||||||| |||| ||||||||||| | || | |||||
Sbjct 446332 AGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCC 446391
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT-CTCGCTC 199536
|| ||||| || || |||||||| | |||||||||||| ||| ||| |||| || |
Sbjct 446392 TCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCG 446451
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| || || | |||| |||||| | | || || || | || || ||
Sbjct 446452 CTG-ATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGT 446510
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||| ||||| | || || | ||||| || ||||||
Sbjct 446511 CTTTCCCGTCAACGTCTTTATGAAAATCTG---CATTTT 446546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178920406710293
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |