Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq23 113 5e-20
seq34 109 6e-19
>seq23
Length=679897
Score = 113 bits (124), Expect = 5e-20
Identities = 160/223 (72%), Gaps = 4/223 (2%)
Strand=Plus/Plus
Query 46376 AAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGC 46435
||||| | |||| ||||| || |||||| ||||| || || ||||| ||||||||
Sbjct 614885 AAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGG 614944
Query 46436 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCC 46495
|||| || ||||||||||| ||||| || | ||||||||||| | || | | |||
Sbjct 614945 CCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCC 615004
Query 46496 TTGTCCATGATCTTCTTCTT--GAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCG 46553
||||| ||||||| |||| ||| ||| | || || | || ||||| || | |
Sbjct 615005 TTGTCGCTGATCTTGCTCTTCACAGCTTCG--ATGGTATCATTAGACTCCACTTCAAGAG 615062
Query 46554 TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596
|||| || || || |||| || || | |||||| ||||| ||
Sbjct 615063 TGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTT 615105
>seq34
Length=648589
Score = 109 bits (120), Expect = 6e-19
Identities = 141/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || || ||||| | || |||||||| || || |||||
Sbjct 446352 CTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAA 446411
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| ||||||||||| | || | | |||||||| ||||||| | |||| |
Sbjct 446412 GATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGATCTTGCTTTTGACAGC 446471
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | ||||| | || || || || | || || || || ||||||| ||| || |
Sbjct 446472 CTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTTCCCGTCAACGTCTTTAT 446531
Query 46582 AAAGATTTGCATTTT 46596
|| || ||||||||
Sbjct 446532 GAAAATCTGCATTTT 446546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565237841827080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |