Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq23 113 5e-20 seq34 109 6e-19 >seq23 Length=679897 Score = 113 bits (124), Expect = 5e-20 Identities = 160/223 (72%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 46376 AAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGC 46435 ||||| | |||| ||||| || |||||| ||||| || || ||||| |||||||| Sbjct 614885 AAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGG 614944 Query 46436 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCC 46495 |||| || ||||||||||| ||||| || | ||||||||||| | || | | ||| Sbjct 614945 CCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCC 615004 Query 46496 TTGTCCATGATCTTCTTCTT--GAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCG 46553 ||||| ||||||| |||| ||| ||| | || || | || ||||| || | | Sbjct 615005 TTGTCGCTGATCTTGCTCTTCACAGCTTCG--ATGGTATCATTAGACTCCACTTCAAGAG 615062 Query 46554 TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 |||| || || || |||| || || | |||||| ||||| || Sbjct 615063 TGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTT 615105 >seq34 Length=648589 Score = 109 bits (120), Expect = 6e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| | || |||||||| || || ||||| Sbjct 446352 CTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAA 446411 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | | |||||||| ||||||| | |||| | Sbjct 446412 GATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGATCTTGCTTTTGACAGC 446471 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| | || || || || | || || || || ||||||| ||| || | Sbjct 446472 CTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTTCCCGTCAACGTCTTTAT 446531 Query 46582 AAAGATTTGCATTTT 46596 || || |||||||| Sbjct 446532 GAAAATCTGCATTTT 446546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237841827080