Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq22 145 8e-30
seq34 107 2e-18
seq3 107 2e-18
seq23 96.9 3e-15
>seq22
Length=83673
Score = 145 bits (160), Expect = 8e-30
Identities = 532/820 (65%), Gaps = 31/820 (4%)
Strand=Plus/Minus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
||||| || ||||| || || || |||| ||||| | ||| ||||| || || |||
Sbjct 17098 TTCTCGAAGAAATTGGTCTTACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTG 17039
Query 132685 GCTGTGTTGTAGTGCTTGGTGCCGATC-AGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743
|| ||||| |||| | | || | | | |||||||| || || ||||| |||||
Sbjct 17038 GCGACATTGTACACCTTGTT-CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTC 16980
Query 132744 GATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGT 132803
|| || || ||| ||| ||| | || || |||| || |||| || || |
Sbjct 16979 GACATACTGGTTCATTAAGTCGGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCT 16920
Query 132804 GAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT---TTCCCTAACGCGCGCCGC 132860
|| | ||||| || |||| || || || | || ||| |||| | |
Sbjct 16919 GAAGTACTCCTGCTCAATATCGACTGCTTCAGTAAGAATACGTTCTATAACAAAAG--GT 16862
Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920
||| | | ||| | ||||||| || | | | ||||| || ||| ||| | |||||
Sbjct 16861 GCTGGTCTGTT-CTCCAAATGGCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTC 16803
Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980
||| | ||||| | ||||| ||||| ||||| || ||||| ||||| || ||||||||
Sbjct 16802 GTCACGAGAAATCAACTCGTTACTGAAGGTCAAACCCGGCATAAGGCCACGCTTTTTGAG 16743
Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040
||| || || || || || || || ||||| || ||||| || || ||||| || ||
Sbjct 16742 CCAGAAAATAGCAGCAAAGGATCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCGAC 16683
Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100
|| ||||| |||| | ||||| | | | |||||||| || ||||| | ||||||
Sbjct 16682 TAGTCGCTCAGCGAAACTAGCTTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTT 16623
Query 133101 -TTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA--AACGGAGTTTCTCTTCCGA 133157
|||| ||| || ||||| ||||| | || | ||| | | ||| ||| |
Sbjct 16622 CTTCTGAATGGCA-GGAATCGTGAAAATGGCATCAAAAAGGAACTGGGATTC-CTT---A 16568
Query 133158 GGAAC--GCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATG 133215
| | ||||| ||||| || || |||||||| ||||| | |||||||||
Sbjct 16567 GTTTCCTTGACGTAAGTGTCAATAAGCAGACTGTACATTTCAGAGTGAATGTTCTCCATC 16508
Query 133216 GCGATTTGAAAGCCGTAAAAGCACCGCGCCTC-----GACCACCTGCACTTCTTGAGCGA 133270
|| || || |||||||||||| ||||| |||| | || | || ||
Sbjct 16507 ATAATCTGGAATCCGTAAAAGCACTTGGCCTCAGAGATACCAACGTCAGTACT-----GA 16453
Query 133271 AACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGT 133330
| | |||| || || || || || ||||| || ||||| ||||| || || ||
Sbjct 16452 ACCTGGAAACCAAGTTCTCATTCACAATACCGTCACTAGCGGCAAAAAACGCTAGAACTC 16393
Query 133331 GCTTGATGAAATGGCGCTCGTTGTCGTTCAAGC---GCTCCCAGTCGCGCGTGTCCTTGG 133387
| || || | || || | ||| |||| | | |||||||| | | |||| ||
Sbjct 16392 GTGAAATAAAGTAACGTTCATCGTCATTCAGCCTAAGTTCCCAGTCCTGAATATCCTGGG 16333
Query 133388 ACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427
||| || ||||| || ||||| || || || || ||
Sbjct 16332 CCAGATCAACCTCTTCAGTTGTCCAGAAAGAAGCTTCAGC 16293
>seq34
Length=648589
Score = 107 bits (118), Expect = 2e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||| |||| ||| | ||||| || || || ||| |||| || ||| |
Sbjct 446546 AAAATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCT 446487
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | | ||| || ||| |||||| || || ||||| | |||
Sbjct 446486 AATGACACCATCGAGGCTGTCAAAAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGAC 446427
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| | || | ||| || |||||||| || || | |||||||| ||||||
Sbjct 446426 CAGCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTTTCTGACTAC 446367
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||| ||||| | || | || |||||||| |||
Sbjct 446366 AACATCCAGAAGGAGTCCACTATTCACTTGGTGCTTCGT 446328
>seq3
Length=255871
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||| | || || || || || || || |||||| |||| || || ||
Sbjct 112582 AAAATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCC 112641
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| |||| | | | | | |||||| ||||| || || || || ||||| | ||
Sbjct 112642 AATGACACCATTGAGGC-CGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGA 112700
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
|||||| || || || | ||| ||||||||||| || || | ||||||||| |||||
Sbjct 112701 CCAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTA 112760
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||| || || | || || || ||||| || ||| | | |||||
Sbjct 112761 CAACATCCAGAAAGAGTCCACTCTTCACTTGGTTCTCCGTCTTCGTGGCGG 112811
>seq23
Length=679897
Score = 96.9 bits (106), Expect = 3e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387
|| ||| |||||| || || ||||| | ||||| ||||| || || | ||| |||||
Sbjct 615018 AAGATCAGCGACAAGGAAGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCAAG 614959
Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447
||||| || |||| ||||| || ||| || |||||||| ||||| | || ||||||
Sbjct 614958 CAGCTTGAGGACGGCCGCACTCTTTCCGAGTATAACATCCAGAAGGAGTCCACTCTGCAT 614899
Query 38448 TTGGTGCTGCGTTTGAGAGGCGG 38470
||||| || |||||| | || ||
Sbjct 614898 TTGGTTCTCCGTTTGCGTGGTGG 614876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172306079360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |