Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq12 136 2e-26
seq34 116 1e-20
seq3 113 2e-19
>seq12
Length=715620
Score = 136 bits (150), Expect = 2e-26
Identities = 280/413 (68%), Gaps = 9/413 (2%)
Strand=Plus/Plus
Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATT 451255
|||||| ||| | || | || || ||||| || || ||||| ||||||| || ||
Sbjct 374416 AAGCCCGTCATTGAGGTTGAATACAAGGGTGAGACCAAGACTTTCACTCCTGAGGAGATC 374475
Query 451256 TCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTT 451315
|| || |||||||| || || ||||| || || || || || | ||| | |||
Sbjct 374476 TCTTCCATGGTTCTCACCAAGATGAAGGAGACTGCTGAGGGCTACCTCGGTGGTAAGGTT 374535
Query 451316 ACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAA 451375
| | || || |||||||| || ||||| ||||| || | || || || || || ||
Sbjct 374536 GATCAGGCCGTTATTACTGTCCCTGCTTACTTCAACGACTCCCAGCGTCAGGCTACCAAG 374595
Query 451376 GATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCT 451435
||||| || |||||||||| | ||||||||||| ||||| ||||| ||||| || |||
Sbjct 374596 GATGCCGGTACTATTGCTGGTCTTAATGTTCTTCGTATTATCAATGAGCCTACCGCTGCT 374655
Query 451436 GCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA-GAAGaaaaaaaTATTTTAGTATT 451494
||| | || || || || | | | ||| || | || | || || | | ||
Sbjct 374656 GCTATTGCCTACGGTCTTG----ACAAGAAGGGCCAGGGTGAGCACAACGTTCTTATCTT 374711
Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCA--ATTGAAGATGGGGTATTT 451552
||||| ||||| || || ||| ||| | ||| | ||||| || || | ||
Sbjct 374712 CGATTTGGGTGGTGGTACCTTCGAT--GTCTCTCTTTTGAGCATTGATGACGGTATCTTC 374769
Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| || ||||| || |||||||||||| | || ||||| ||| | |||||
Sbjct 374770 GAGGTCAAGGCCACTGCTGGTGATACTCACTTGGGTGGTGAGGATTTCGATAA 374822
>seq34
Length=648589
Score = 116 bits (128), Expect = 1e-20
Identities = 203/295 (69%), Gaps = 9/295 (3%)
Strand=Plus/Plus
Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379
|||| || ||||||| |||||||| ||||||||| | || || |||||||| || ||||
Sbjct 581017 ATGCCGTTGTTACTGTCCCCGCTTACTTCAATGATTCTCAGCGTCAAGCAACCAAGGATG 581076
Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439
| || || |||| ||||| || ||| | || || |||| || || || || ||||||
Sbjct 581077 CTGGCCAGATTGTCGGTTTGAACGTTTTGAGAGTTGTTAACGAGCCCACCGCTGCTGCTT 581136
Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499
| || || || || | | |||| | || || || ||| || || |||
Sbjct 581137 TGGCTTACGGTCTTG-------AGAAGA--CTGACGATAAGGTCATTGCCGTCTTCGATC 581187
Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559
||||||| || || |||| ||| | ||| || | | || || || || || |
Sbjct 581188 TTGGTGGTGGTACCTTCGATATCTCTATTCTTGAGATCCAGAAGGGTGTCTTCGAGGTCA 581247
Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGT 451614
|| | || || ||||||||||| || || ||||| ||| | |||| ||| |||||
Sbjct 581248 AGTCCACTAACGGTGATACTCACCTTGGTGGTGAGGATTTCGATATTGCCATTGT 581302
Score = 91.5 bits (100), Expect = 6e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | |||||| | || || |||| || || |||||||| || || ||||| ||
Sbjct 446544 AATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCTAA 446485
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||| | ||| || ||| | ||| || || || |||||||| ||||||||||| ||
Sbjct 446484 TGACACCATCGAGGCTGTCAAAAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGACCA 446425
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|| ||||| || ||| | || ||||| || || ||||| | || | | || || ||
Sbjct 446424 GCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTTTCTGACTACAA 446365
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258
|| | ||||| | || ||||||| ||
Sbjct 446364 CATCCAGAAGGAGTCCACTATTCACTTGGT 446335
>seq3
Length=255871
Score = 113 bits (124), Expect = 2e-19
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | |||||| | || || || || || || ||||| || || || ||||||||
Sbjct 112584 AATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCCAA 112643
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||| | |||||| || | || |||||| ||||||||||| ||||||||||| ||
Sbjct 112644 TGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGACCA 112703
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
||||||| | || ||| | || ||||| ||||||||||| | || | | || || ||
Sbjct 112704 ACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTACAA 112763
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258
|| | || || | || |||||||| ||
Sbjct 112764 CATCCAGAAAGAGTCCACTCTTCACTTGGT 112793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975716400202532
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |