Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq12 244 8e-59 seq34 114 1e-19 seq66 102 6e-16 seq16 95.1 9e-14 >seq12 Length=715620 Score = 244 bits (270), Expect = 8e-59 Identities = 941/1458 (65%), Gaps = 20/1458 (1%) Strand=Plus/Minus Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 ||||| ||||| || |||| || || || ||||| || || || | || |||||| Sbjct 375632 TTAGTGATAGTGATCTTCTGAGACTTACCAGTAGATTTGTCGGCAGCGGAGACGTTAAGA 375573 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| || ||||| | ||| || || || || || ||||| || | | ||||| Sbjct 375572 ATACCGTTAGCATCGACATCGAAGGTAACCTCGATCTGAGGAGTACCACGGGGGGCAGGG 375513 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | || | || || | || ||||| ||| | || ||| Sbjct 375512 GGGATACCAGAAAGCTCGAACTTACCGAGGATGTTGTTATCACGAGTAAGAGGACGCTCA 375453 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||||||| | ||||| || ||| || || || | | ||| | || | ||| Sbjct 375452 CCCTCGAAGACCTGGATCAAGACACCAGGCTGGTTGTCAGCAGCAGTAGAGAAGA-TCTC 375394 Query 517454 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 || || || ||||| || ||||||| |||| ||||| | ||||| || Sbjct 375393 AGACTTCTTGGTGGGAATAGTGCTGTTTCTGGGGATAAGCTTGGTGAACTGGCCACCAGC 375334 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC 517572 || || | ||| | ||| | ||||| |||||| | || | | | ||| || || Sbjct 375333 GGTCTCAATACCCAAAGACAAAGGAGCGACATCGAGAAGCAACAAGTCCTGA-GTCTTGG 375275 Query 517573 ATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 517631 | || | | |||| ||| ||||| || || | ||| ||||| || ||||| || |||| Sbjct 375274 AAGAGGTGTCACCAGTAAGGATAGCAGCCTGGACAGCGGCACCGTAAGCAACGGCCTCAT 375215 Query 517632 CAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTA 517691 |||| || | || || | | |||||| ||| || | |||| || | ||| | Sbjct 375214 CAGGGTTGATAGAACGGTTCAACTCCTTACCAGAGAAGAAGTCAGAAACGAGCT-TCTGA 375156 Query 517692 -CCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCC 517750 |||| || ||||||| || || ||||| | ||||| || | || | || || Sbjct 375155 ACCTTGGGGATACGAGTAGAACCACCAACAAGGACAATCTCGTTAACATCAGACTTGGAG 375096 Query 517751 AGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAA 517810 | || | |||| ||||| || ||||| || | | | | || | || Sbjct 375095 ACCTTAGCATCCTTCAAAACCTTCTCAACAGGGGCCATGGTAGAACGGAAGAGATCCTGG 375036 Query 517811 CAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAACAA 517869 || || || ||||| || | ||| | || | || || ||||| || ||| | | Sbjct 375035 CAGAGCTCCTCGAAACGGGCACGAGTGATAGA-AGTGTAGAAGTCAATACCCTCGTAAAG 374977 Query 517870 AGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACA 517929 ||| |||| ||||| | || ||||| |||||||| || ||||| |||||||| || || Sbjct 374976 AGAGTCAATCTCAATAGGGGTCTGAGTAGAAGAAGAGAGGGCACGCTTAGCACGCTCGCA 374917 Query 517930 TGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTT 517987 || || || || | || | || |||| || | | | || | || || ||| Sbjct 374916 AGCGGTTCTAAGACGACGAAGAGCAC--GCTGGTTACCAGTGATGTCCTTCTTGTACTTT 374859 Query 517988 CTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAAT 518047 |||||||| || | | | | | || || || ||||| ||||| ||||| ||||| Sbjct 374858 CTCTTGAACTCCTGAGCGAAGTGGTTAACGAGGCGGTTATCGAAATCCTCACCACCCAAG 374799 Query 518048 TTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTT 518107 | ||||| || | || || | || | ||| | || || |||| |||||||| Sbjct 374798 TGAGTATCACCAGCAGTGGCCTTGACCTCGAAGATACCGTCATCAATGCTCAAAAGAGAG 374739 Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG--T 518165 ||||| ||| |||||||||| ||| || ||||| || || | || || | | Sbjct 374738 ACATCGAAGGTACCACCACCCAAATCGAAGATAAGAACGTTG--TGCTCACCCTGGCCCT 374681 Query 518166 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 518225 | || |||||||| || |||| ||||||||| || || ||||| ||||| | | ||||| Sbjct 374680 TCTTGTCAAGACCGTAGGCAATAGCAGCAGCGGTAGGCTCATTGATAATACGAAGAACAT 374621 Query 518226 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 518285 ||||||||||||| | || ||||| || || || || | || || ||||| || || | Sbjct 374620 TAAGACCAGCAATAGTACCGGCATCCTTGGTAGCCTGACGCTGGGAGTCGTTGAAGTAAG 374561 Query 518286 CAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCT-TGCCGTTTGT 518344 |||| |||||||||||||| | | || | ||| | | ||| || || || | Sbjct 374560 CAGGGACAGTAATAACGGCCTGATCAACCTTACCACCGAGGT-AGCCCTCAGCAGTCTCC 374502 Query 518345 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTT 518404 ||||| || | | || ||| || || || | || || | | ||||| ||| Sbjct 374501 TTCATCTTGGTGAGAACCATGGAAGAGATCTCCTCAGGAGTGAAAGTCTTGGTCTCACCC 374442 Query 518405 TGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTAT 518464 | ||| || |||| || ||||| | |||||| || || || | | Sbjct 374441 TTGTATTCAACCTCAATGACGGGCTTATTGTTCTTGTCAATAACCTTGAAAGGGAAATGC 374382 Query 518465 TTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAATTAATCGTTTTGCATC 518523 || ||||| | | | || || |||| | | | ||||| | || || ||||| Sbjct 374381 TTAATATC-GTTCTGAGTCTCAGGATCATCCATCTTACGGCCAATAAGACGCTTGGCATC 374323 Query 518524 AAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATG 518583 || | ||||| | || || || ||||| |||| ||||| ||||| ||||| ||| | Sbjct 374322 GAAGACGGTATTAGAAGGGTTCATGGCAGCCTGATTCTTGGCGGCATCACCAATAAGACG 374263 Query 518584 TTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAAT 518643 || || || || || | ||| | || ||||| || || ||||| ||||| || ||||| Sbjct 374262 CTCAGTGTCAGTGAAGGCAACGAACGAAGGAGTAGTACGGTTACCCTGATCGTTGGCAAT 374203 Query 518644 AATTTCAACTTTACCATT 518661 |||||||||| | |||| Sbjct 374202 AATTTCAACTCTGTCATT 374185 >seq34 Length=648589 Score = 114 bits (126), Expect = 1e-19 Identities = 156/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 518503 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGA--TTAATTGCAGCTTGATAT 518560 |||||| | || || ||||||||| ||||| || | ||| ||||| |||| Sbjct 411911 ACCAATGATACGCTTGATATCAAAAATGGTATT--TTCAACGTTAGAGGCAGCCTGATTC 411854 Query 518561 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 518620 || || ||||| |||| || | |||| || | || | ||| || || ||||| | Sbjct 411853 TTAGCAGCATCACCAACCAAACGTTCGCCATCCTTGAAAGCAACGTAAGAAGGAGTGATA 411794 Query 518621 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680 || ||||| ||||| || |||| |||||||||| | |||| ||| |||||||||||| Sbjct 411793 CGGTTACCCTGATCGTTGGCAAGAATTTCAACTCTGCCATGCTGCATAACACCTACACAA 411734 Query 518681 CTAAAAGTTGTTCCTAAATCAATACCAATAGCAATT 518716 | ||||| |||||||||||||||||| ||||| Sbjct 411733 GAGTATGTTGTACCTAAATCAATACCAATAACAATT 411698 Score = 98.7 bits (108), Expect = 8e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || |||||||| || || ||||||||||| || || || |||| || ||||||||| || Sbjct 581155 TTCTCAAGACCGTAAGCCAAAGCAGCAGCGGTGGGCTCGTTAACAACTCTCAAAACGTTC 581096 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||| |||| || ||||| || || ||||| | || ||||| || || || || Sbjct 581095 AAACCGACAATCTGGCCAGCATCCTTGGTTGCTTGACGCTGAGAATCATTGAAGTAAGCG 581036 Query 518288 GGAACAGTAATAACGGCAT 518306 || ||||||| |||||||| Sbjct 581035 GGGACAGTAACAACGGCAT 581017 Score = 86.0 bits (94), Expect = 5e-11 Identities = 107/145 (74%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 305870 CTGTAATCAGAAATATATAATCCCATAGCTTGTCTGGCTTGATTGTACT--GGAAAATAC 305927 ||||||| || | | ||| |||||||| ||| | | || | ||| || || || Sbjct 144763 CTGTAATTAGTTAAACATACACCCATAGCCTGTTTACCC--ATAGCACTCTGGTAAGTAT 144706 Query 305928 CACGAGGAGATTGATTATGATCTGGGAAAGGAATATTAGATGAAATTAGTCCGAGAATCA 305987 ||| || ||||| ||||||||||||||||||||| |||| | | | | || | ||||| Sbjct 144705 TACGCGGTGATTGGTTATGATCTGGGAAAGGAATAATAGAGGCACTAATGCCCAAAATCA 144646 Query 305988 TACACGGATGAATTTCACAATGAGT 306012 ||| |||||||| |||||||| || Sbjct 144645 TACTTGGATGAATCTCACAATGCGT 144621 >seq66 Length=396251 Score = 102 bits (112), Expect = 6e-16 Identities = 412/639 (64%), Gaps = 19/639 (3%) Strand=Plus/Plus Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 |||| ||||| | ||| ||||| | |||| || | ||||| | || | ||| | | Sbjct 198413 TATCGAAATCCTGACCACCCAAGTGGGTATCACCAGCAGTAGCCTTAACATTGAAGACAC 198472 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 || | | | ||| | |||| ||||| || |||||||||| ||| ||||| || | Sbjct 198473 CACCCTGGATAGAGAGCAGAGAGACATCGAAAGTACCACCACCCAAATCGAAAATGAGAA 198532 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCA---AGACCATACGCAAAAGCAGCAGCAGTTG 518201 | | | | || | ||| || | || ||||| || |||| ||||||||| || | Sbjct 198533 CGTGCTTCTCCTCGTCAGTCTTACCAGCACCGAGACCGTAAGCAATAGCAGCAGCGGTAG 198592 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 | || || || || | | ||| ||||||||||| || || ||||| ||||| || | Sbjct 198593 GCTCGTTGATGATACGAAGAACGTTAAGACCAGCGATGGAACCAGCATCCTTAGTAGCCT 198652 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA--CTTCTTT 518319 | | || || ||||| || || ||||| ||||| || || || | || | |||| | Sbjct 198653 GACGCTGGGAGTCGTTGAAGTAGGCAGGGACAGTGATGACAGCCT-TGTCAACCTTC-TG 198710 Query 518320 ACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTC 518379 ||| | || || ||| ||||||||| || | ||| | || |||| | Sbjct 198711 GGCAAGCTTGGCCTCAGCGATTTCCTTCATTTTAACCAAGACCATGGCAGAGATTTCCTG 198770 Query 518380 TGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACC--- 518436 ||||| | ||| | || || | || || || | |||| ||||| Sbjct 198771 GGGGGAGAAAGACTTAGTCTCGTTAAGGTACTGGACCTC-GATCATGG--GGTTACCGTT 198827 Query 518437 AACATTAATAACTTTAAATGGCCAGTATTTCATAT-CTGATTGAACACTTTGG--TCATT 518493 | |||||| || || |||||| || || | ||| | | || |||| || | Sbjct 198828 GTGGTCAATAACCTTGAAAGGCCAGCTCTTGATGTCCTGCTGG---ACGTTGGCATCGTC 198884 Query 518494 AAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGC 518553 ||| | ||||| | || || ||||| |||| ||| ||| || |||| ||||| Sbjct 198885 GAAACGACGGCCAATGAGACGCTTAGCATCGAAAACAGTGTTGCGGGGGTTAAGAGCAGC 198944 Query 518554 TTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGG 518613 |||| || || ||||| ||||| ||| | || | || || || | |||| | || || Sbjct 198945 CTGATTCTTAGCAGCATCACCAATAAGACGCTCCTTATCAGTGAAAGCAACAAAGGAAGG 199004 Query 518614 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAAC 518652 ||| ||||||||||| ||||| || || || || || Sbjct 199005 AGTCACACGATTACCTTGCTCATTAGCGATGATCTCGAC 199043 >seq16 Length=115662 Score = 95.1 bits (104), Expect = 9e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||||||||||||| | | |||||||||||||| || |||||| || | ||| ||| Sbjct 17366 GGTAAAGAAGGTCGTTTGCGTGGAAATTTGATGGGCAAGCGTGTCAATTTCAGTGCTCGT 17425 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCC 668964 |||||||| || ||| || ||| ||| |||| || | ||||||||||| Sbjct 17426 ACAGTTATCACCGGTGACCCTAATCTTGATCTCGATCAGGTTGGTGTTCC 17475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780818479759774