Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq10 123 3e-23
>seq10
Length=187202
Score = 123 bits (136), Expect = 3e-23
Identities = 184/259 (71%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502
|| || ||||| | |||||||||| ||||||||||||||||| || || || | |
Sbjct 23245 CAGAGATTTGGAGTCCCTATGGGATTCGGAGGTCCTCATGCTGGTTTTTTCGCCGTTAAA 23304
Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTA--GATAGCGAAG 158560
|| | | ||| |||| || || || |||||| | || || || | ||||| |
Sbjct 23305 GATGAATTTAAACGAAAAATTCCAGGTAGAATTATCGGC--GTGAGCAAGGATAGATTGG 23362
Query 158561 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAG 158620
|| || || |||||| | || ||||| ||||||||||||||||| |||||||| ||||
Sbjct 23363 GTGATCCTGCCTACAGACTTGCTCTACAAACTAGAGAGCAGCATATTAGAAGAGATAAAG 23422
Query 158621 CAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAG 158680
| || || || || || || |||||||| | || ||||| |||| | ||||| |
Sbjct 23423 CTACTTCGAATATTTGTACTGCGCAAGCACTTTTAGCCAATATCTCTGCTATGTATGCGG 23482
Query 158681 CATATCATGGTGCAGATGG 158699
|| |||||| | | |||
Sbjct 23483 TTTACCATGGTTCGGCTGG 23501
Score = 107 bits (118), Expect = 2e-18
Identities = 162/223 (73%), Gaps = 8/223 (4%)
Strand=Plus/Plus
Query 157891 GGATACTATGGAACCATCACACCCCCA-GTCATACAGCGAAACGTTCTTGAGAATCCTAG 157949
|| ||||||||||| || || || | ||||| ||||||| | |||||||||||||
Sbjct 22702 GGTTACTATGGAACGAT-ACTTCCAAACGTCATTTTGCGAAACTTGCTTGAGAATCCTAA 22760
Query 157950 TTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTT 158009
||||| || ||| ||||| |||||| | || |||||||| || || | || | ||
Sbjct 22761 CTGGTATACCAGTTATACTCCTTATCAACCAGAAATATCTCAAGGCAGGCTTGAGTCATT 22820
Query 158010 ATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATA--GCAAACGCATCT 158067
| |||||| ||||||| | | || || || || || || |||| || ||||| ||
Sbjct 22821 ACTCAATTTCCAAACGATGGTAACTGATCTAACTGG--TATGGATATCGCCAACGCTTCA 22878
Query 158068 CTATTAGATGAAGCAACTGCAGCAGCA-GAAGCAATGCTGTTA 158109
|| | ||||||||||| || || ||| ||||| ||| | |||
Sbjct 22879 TTACTTGATGAAGCAACAGCTGC-GCAGGAAGCTATGGTTTTA 22920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588050619299440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |