Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq34 161 8e-34
seq12 154 1e-31
seq3 111 1e-18
seq66 109 4e-18
>seq34
Length=648589
Score = 161 bits (178), Expect = 8e-34
Identities = 367/545 (67%), Gaps = 13/545 (2%)
Strand=Plus/Plus
Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053
||| ||||| |||||||| || ||||| |||||| |||||| ||| |||| | |||
Sbjct 411704 TATTGGTATTGATTTAGGTACAACATACTCTTGTGTAGGTGTTATGCAGCATGGCAGAGT 411763
Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113
||||||| ||||||| ||||| |||||| | | ||||| ||||| ||| |||||| |||
Sbjct 411764 TGAAATTCTTGCCAACGATCAGGGTAACCGTATCACTCCTTCTTACGTTGCTTTCAAGGA 411823
Query 550114 AACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATAC 550173
|||| ||| ||||||||||| || || |||| || | ||| | |||||
Sbjct 411824 TGGCGAACGTTTGGTTGGTGATGCTGCTAAGAATCAGGCTGCCTCTAACGTTGAAAATAC 411883
Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGA 550233
||||||||| || ||| | ||||| | || | ||||| | ||| ||| ||
Sbjct 411884 CATTTTTGATATCAAGCGTATCATTGGTCTGAAATTCAGAGATTCTAGTGTCCAGAAGGA 411943
Query 550234 TAT--GAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-C 550290
||| |||| ||| |||||| | |||| | | | |||||| | | ||| |
Sbjct 411944 TATCAGAAG-ATT-CCCTTTCACAGTTGTAGAGAAGGATAGCAAACCTGTTGTCCAAGTC 412001
Query 550291 TACTCATGAAGGATCTGTTAAACAATTTTCA--CCAGAACAAATTTCATCTATGGTTTTA 550348
||| || ||| | | | ||||| || || | || | ||||||||
Sbjct 412002 AACT-TCGACGGA-----GAGAAGACTTTCACTCCTGAGGAGATCAGTGCCATGGTTTTG 412055
Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408
|| ||||| || | || | | | | ||| | | || || |||| || |
Sbjct 412056 GGTAAGATGAAGCAGATTGCTGAGGACTATCTCGGTGAGAAGGTCACTCATGCTGTTGTC 412115
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
||||| || || || |||||||| | || ||||| ||||| || |||||||| ||||
Sbjct 412116 ACTGTCCCTGCCTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTACTATT 412175
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
|| || | | |||||||||| | ||||||| ||||||||||| || |||| || ||
Sbjct 412176 GCCGGTTTGACTGTTCTTCGTGTCGTCAATGAGCCTACTGCTGCCGCTATTGCCTACGGT 412235
Query 550529 CTTGA 550533
|||||
Sbjct 412236 CTTGA 412240
>seq12
Length=715620
Score = 154 bits (170), Expect = 1e-31
Identities = 340/501 (68%), Gaps = 14/501 (3%)
Strand=Plus/Plus
Query 550043 AATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTT 550102
|||| | |||||||||||||||||| ||||| |||||| | |||||||| || | |||
Sbjct 374185 AATGACAGAGTTGAAATTATTGCCAACGATCAGGGTAACCGTACTACTCCTTCGTTCGTT 374244
Query 550103 TCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAAT 550162
| ||||| || ||||| | | | |||||||||| || || |||| || | ||
Sbjct 374245 GCCTTCACTGACACTGAGCGTCTTATTGGTGATGCCGCCAAGAATCAGGCTGCCATGAAC 374304
Query 550163 CCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTC---G 550219
||| | ||||| | || ||||| || ||| | ||||| | | | ||||| | |
Sbjct 374305 CCTTCTAATACCGTCTTCGATGCCAAGCGTCTTATTGGCCGTAAGATGGATGATCCTGAG 374364
Query 550220 ACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCT 550279
||| ||| ||||| ||||||| |||||| | || || | || ||
Sbjct 374365 ACT---CAGAACGATATTAAGCATTTCCCTTTCAAGGTTATTGACAAGAACAATAAGCCC 374421
Query 550280 TATATTGAAGCTACTCATGAAGGATCTGTTAAACAATTTT-CACCAGAACAAATTTCATC 550338
||||| | | | |||| | | || | ||| | || || | || || ||
Sbjct 374422 GTCATTGAGGTTGAATAC-AAGGGTGAGACCAAGACTTTCACTCCTGAGGAGATCTCTTC 374480
Query 550339 TATGGTTTTAATGAAAATGAAACAAACAGCC-AGTGCTT--TTGTTGGTCAAGAAGTTAC 550395
|||||| | | || ||||| | || || || ||| | | |||| ||| |||
Sbjct 374481 CATGGTTCTCACCAAGATGAAGGAGACTGCTGAGGGCTACCTCGGTGGT-AAG--GTTGA 374537
Query 550396 GGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGA 550455
| || || || ||||| || || || || || ||||| || ||||| ||||| || ||
Sbjct 374538 TCAGGCCGTTATTACTGTCCCTGCTTACTTCAACGACTCCCAGCGTCAGGCTACCAAGGA 374597
Query 550456 TGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGC 550515
||| || ||||||||| |||||||||||||||||||||||||| ||||| ||||||||
Sbjct 374598 TGCCGGTACTATTGCTGGTCTTAATGTTCTTCGTATTATCAATGAGCCTACCGCTGCTGC 374657
Query 550516 ACTTGCATATGGACTTGATAA 550536
|||| || || ||||| ||
Sbjct 374658 TATTGCCTACGGTCTTGACAA 374678
>seq3
Length=255871
Score = 111 bits (122), Expect = 1e-18
Identities = 160/221 (72%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314
|||||||| || | ||||| || ||| | | ||| || ||||| |||| || || |
Sbjct 112802 AGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGG--ATGTTGTAGTCAGAGAGGGTGC 112745
Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374
||||||||| ||||| || || || ||||| | ||| || ||||||||||| ||||
Sbjct 112744 GGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTT 112685
Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGA 563433
| ||||| |||||| ||||| |||||||| || ||| || || | | |||||
Sbjct 112684 CCTTATCACTAATTTTGCTCTTTACGGCCTCAATGGTGTCATTG-GATTCAACCTCGAGG 112626
Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | ||| || || || ||||| || | |||||| |||||
Sbjct 112625 GTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCAT 112585
>seq66
Length=396251
Score = 109 bits (120), Expect = 4e-18
Identities = 315/481 (65%), Gaps = 4/481 (1%)
Strand=Plus/Minus
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
|| || || || || ||||| |||||||| | ||||| || | |||| |||||||
Sbjct 199043 GTCGAGATCATCGCTAATGAGCAAGGTAATCGTGTGACTCCTTCCTTTGTTGCTTTCACT 198984
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171
|| | || | | | |||||||||| || || |||| || || ||| || |||
Sbjct 198983 GATAAGGAGCGTCTTATTGGTGATGCTGCTAAGAATCAGGCTGCTCTTAACCCCCGCAAC 198924
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
||| |||| |||||||| ||| | ||||| | |||| | ||| | | || |||
Sbjct 198923 ACTGTTTTCGATGCTAAGCGTCTCATTGGCCGTCGTTTCGACGATGCCAACGTCCAGCAG 198864
Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-C 550290
|| || ||| ||||||||| | || || | || || || || || | |
Sbjct 198863 GACATCAAGAGCTGGCCTTTCAAGGTTATTGACCACAACGGTAACCCCATGATCGAGGTC 198804
Query 550291 TACT-CATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349
| | | | || || ||| || || || | |||| || | ||||| ||
Sbjct 198803 CAGTACCTTAACGAGAC--TAAGTCTTTCTCCCCCCAGGAAATCTCTGCCATGGTCTTGG 198746
Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409
| |||||||| ||| || || ||| || | ||| | || || || |
Sbjct 198745 TTAAAATGAAGGAAATCGCTGAGGCCAAGCTTGCCCAGAAGGTTGACAAGGCTGTCATCA 198686
Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469
|||| || || || || || ||||| || ||||| |||||||| |||||||| || |
Sbjct 198685 CTGTCCCTGCCTACTTCAACGACTCCCAGCGTCAGGCTACTAAGGATGCTGGTTCCATCG 198626
Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529
|||| ||||| ||||||||||| ||||| || ||||| |||||||| |||| || || |
Sbjct 198625 CTGGTCTTAACGTTCTTCGTATCATCAACGAGCCTACCGCTGCTGCTATTGCTTACGGTC 198566
Query 550530 T 550530
|
Sbjct 198565 T 198565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029291822123710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |