Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq12 161 6e-34 seq34 152 3e-31 seq66 127 1e-23 seq3 116 2e-20 seq23 93.3 3e-13 >seq12 Length=715620 Score = 161 bits (178), Expect = 6e-34 Identities = 376/555 (68%), Gaps = 14/555 (3%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGT-TTGGCAAAATGGTAA 474387 ||| |||| || ||||| || ||||| ||| ||||||||| || || || || | Sbjct 374134 GCAGTTGGAATCGATTTGGGTACTACATACTCTTGTGTAGCCCACTTTGCTAA-TGACAG 374192 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| ||||| |||||||| || || ||||| | || || || || | ||| | || || Sbjct 374193 AGTTGAAATTATTGCCAACGATCAGGGTAACCGTACTACTCCTTCGTTCGTTGCCTTCAC 374252 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| ||||| | ||||||||| ||||| || || |||| ||||| || ||| ||| Sbjct 374253 TGACACTGAGCGTCTTATTGGTGATGCCGCCAAGAATCAGGCTGCCATGAACCCTTCTAA 374312 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACC-ACTGTCCAAT 474566 ||| | || ||||| || | | ||||| ||||| | |||||| | | || | Sbjct 374313 TACCGTCTTCGATGCCAAGCGTCTTATTGGCCGTAAGATGGATGATCCTGAGACTCAGAA 374372 Query 474567 CTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG 474626 | ||||| |||| ||||| ||||| || | ||| || || || | Sbjct 374373 C-GATATTAAGCATTTCCCTTTCAAGGTTATTGACAAGAACAATAAGCCCGTCATTGAGG 374431 Query 474627 C--AATACACGCAGGTGAAACTAAACAATTTTCAC--CGGAACAAATTTCTTCAATGGTT 474682 |||||| | ||||| || || | |||||| | || | || ||||| |||||| Sbjct 374432 TTGAATACAAG--GGTGAGACCAAG--ACTTTCACTCCTGAGGAGATCTCTTCCATGGTT 374487 Query 474683 TTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGT 474741 | |||| ||||| | || || ||| | || || || | || | | || || Sbjct 374488 CTCACCAAGATGAAGGAGACTGCTGAGGGC-TACCTCGGTGGTAAGGTTGATCAGGCCGT 374546 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 |||||||| || || || || || || || || ||||| || || || ||||| || | Sbjct 374547 TATTACTGTCCCTGCTTACTTCAACGACTCCCAGCGTCAGGCTACCAAGGATGCCGGTAC 374606 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 ||||| |||||||||||| | |||||||| ||||| || || || || || |||| || Sbjct 374607 TATTGCTGGTCTTAATGTTCTTCGTATTATCAATGAGCCTACCGCTGCTGCTATTGCCTA 374666 Query 474862 TGGTCTTGATAAGAA 474876 |||||||| ||||| Sbjct 374667 CGGTCTTGACAAGAA 374681 Score = 109 bits (120), Expect = 4e-18 Identities = 469/736 (64%), Gaps = 8/736 (1%) Strand=Plus/Plus Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 ||||||||||| ||||| || ||||||||||| || || |||||| ||||||| || || Sbjct 374902 CGTCTTAGAACCGCTTGCGAGCGTGCTAAGCGTGCCCTCTCTTCTTCTACTCAGACCCCT 374961 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 |||| |||| ||||||| || || ||||| | | ||| ||| || | || Sbjct 374962 ATTGAGATTGACTCTCTTTACGAGGGTATTGACTTCTACACTTCTATCACTCGTGCCCGT 375021 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || || || | || |||||||| | || || | || ||||| | ||| | Sbjct 375022 TTCGAGGAGCTCTGCCAGGATCTCTTCCGTTCTACCATGGCCCCTGTTGAGAAGGTTTTG 375081 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| |||| | ||| || | || | || ||||| ||||| || ||||| || Sbjct 375082 AAGGATGCTAAGGTCTCCAAGTCTGATGTTAACGAGATTGTCCTTGTTGGTGGTTCTACT 375141 Query 475727 AGAAT-TCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGA 475785 | || |||| | ||| | | |||| | || |||||| |||| || Sbjct 375142 CGTATCCCCAAGGTTCAGA-AGCTCGTTTCTGACTTCTTCTCTGGTAAGGAGTTGAACCG 375200 Query 475786 AAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATC 475845 | | || |||||||| || ||||| || || || |||||||| || ||||| | | Sbjct 375201 TTCTATCAACCCTGATGAGGCCGTTGCTTACGGTGCCGCTGTCCAGGCTGCTATCCTTAC 375260 Query 475846 AGGTCA---ATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTC 475902 ||| | || | || ||| | | | | | ||| | || || |||| | || Sbjct 375261 TGGTGACACCTCTTCCAAG--ACTCAGGACT-TGTTGCTTCTCGATGTCGCTCCTTTGTC 375317 Query 475903 ATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTAT 475962 || ||| |||| || | ||| || | || || ||||| |||||| | |||| Sbjct 375318 TTTGGGTATTGAGACCGCTGGTGGCCAGTTCACCAAGCTTATCCCCAGAAACAGCACTAT 375377 Query 475963 CCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCAT 476022 || ||| || || | | || || ||| | |||| || || | ||| || Sbjct 375378 TCCCACCAAGAAGTCTGAGATCTTCTCTACTGCTGCTGACAACCAGCCTGGTGTCTTGAT 375437 Query 476023 CCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAA 476082 ||| |||| || ||||| | | ||| ||||| |||| || || | || | Sbjct 375438 CCAGGTCTTCGAGGGTGAGCGTCCTCTTACTCGTGATAACAACATCCTCGGTAAGTTCGA 375497 Query 476083 TCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATAT 476142 ||| ||||| || ||||| ||| | || |||||| || || ||||| || ||| | Sbjct 375498 GCTTTCTGGTATCCCCCCTGCCCCCCGTGGTACTCCTCAGATCGAGGTTACCTTCGATGT 375557 Query 476143 TGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAGAGTAAAAA 476202 ||||| || ||||||||||| || | ||| || ||||||| | ||| | | || Sbjct 375558 CGATGCTAACGGTATTCTTAACGTCTCCGCTGCCGACAAATCTACTGGTAAGTCTCAGAA 375617 Query 476203 TATAACTATTACAAAC 476218 || ||||| || ||| Sbjct 375618 GATCACTATCACTAAC 375633 >seq34 Length=648589 Score = 152 bits (168), Expect = 3e-31 Identities = 369/551 (67%), Gaps = 11/551 (2%) Strand=Plus/Plus Query 474324 GAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATG 474383 |||||| ||||||||||||||||| || || ||| |||||||| |||| ||| ||| Sbjct 411697 GAATTGTTATTGGTATTGATTTAGGTACAACATACTCTTGTGTAGGTGTTATGCAGCATG 411756 Query 474384 GTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTT 474443 | | ||| ||||| ||||||| || || ||||| | | || || || || ||| ||| Sbjct 411757 GCAGAGTTGAAATTCTTGCCAACGATCAGGGTAACCGTATCACTCCTTCTTACGTTGCTT 411816 Query 474444 TTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTG 474503 | | || |||| | | |||| ||||||||||| |||| ||||| ||||| || Sbjct 411817 TCAAGGATGGCGAACGTTTGGTTGGTGATGCTGCTAAGAATCAGGCTGCCTCTAACGTTG 411876 Query 474504 TTAATACTATTTTTGATGCTAAAAGATTGATTGGTC-GTAATTTTGATGATACCACTGTC 474562 ||||| ||||||||| || | | ||||||| | |||| || ||| | | |||| Sbjct 411877 AAAATACCATTTTTGATATCAAGCGTATCATTGGTCTGAAATTCAGA-GATTCTAGTGTC 411935 Query 474563 CAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATA 474622 || ||||| | | ||||| | || || | | | | ||||| | | Sbjct 411936 CAGAAGGATATCAGAAGATTCCCTTTCACAGTTGTAGAGAAGGATAGCAAACCTGTTGTC 411995 Query 474623 GAAGCAATACACGCAGGTGAAACTAAACAATTTTCA--CCGGAACAAATTTCTTCAATGG 474680 ||| | || || || | | || ||||| || || | || | | |||| Sbjct 411996 CAAGTCAACTTCGACGGAGAGA--AGAC---TTTCACTCCTGAGGAGATCAGTGCCATGG 412050 Query 474681 TTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCA 474739 |||| | || ||||| || | || ||| | ||||| || | | || ||| |||| Sbjct 412051 TTTTGGGTAAGATGAAGCAGATTGCTGAGGAC-TATCTCGGTGAGAAGGTCACTCATGCT 412109 Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799 || | ||||| || || || ||||||||| |||| ||||| || || || ||||| || Sbjct 412110 GTTGTCACTGTCCCTGCCTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGT 412169 Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859 | ||||| ||| | | |||| | ||| | | ||||| || || || ||||| |||| Sbjct 412170 ACTATTGCCGGTTTGACTGTTCTTCGTGTCGTCAATGAGCCTACTGCTGCCGCTATTGCC 412229 Query 474860 TATGGTCTTGA 474870 || |||||||| Sbjct 412230 TACGGTCTTGA 412240 Score = 87.8 bits (96), Expect = 1e-11 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || ||||||| || || || || ||||||||||| ||||||||||| || |||| Sbjct 581017 ATGCCGTTGTTACTGTCCCCGCTTACTTCAATGATTCTCAGCGTCAAGCAACCAAGGATG 581076 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || |||| ||| | || ||||| | || |||| || || || || || || Sbjct 581077 CTGGCCAGATTGTCGGTTTGAACGTTTTGAGAGTTGTTAACGAGCCCACCGCTGCTGCTT 581136 Query 474855 TTGCTTATGGTCTTGATAAGA 474875 | ||||| |||||||| |||| Sbjct 581137 TGGCTTACGGTCTTGAGAAGA 581157 >seq66 Length=396251 Score = 127 bits (140), Expect = 1e-23 Identities = 362/544 (67%), Gaps = 13/544 (2%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || || || |||||||| || || || ||| ||||| || || | || | | Sbjct 199100 GCCATCGGCATTGATTTGGGCACCACATACTCGTGTGTCGCCACTTACGAGAACGCT--- 199044 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || || || ||||| ||||||||| | || || || | |||| |||| ||| Sbjct 199043 GTCGAGATCATCGCTAATGAGCAAGGTAATCGTGTGACTCCTTCCTTTGTTGCTTTCACT 198984 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || | || | ||||||||| ||||||||||| |||| ||||| ||| || || Sbjct 198983 GATAAGGAGCGTCTTATTGGTGATGCTGCTAAGAATCAGGCTGCTCTTAACCCCCGCAAC 198924 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 ||| |||| |||||||| | | ||||| ||| ||| || ||| ||| ||||| Sbjct 198923 ACTGTTTTCGATGCTAAGCGTCTCATTGGCCGTCGTTTCGACGATGCCAACGTCCAGCAG 198864 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAA-ACCAT-ATATAGAAG 474626 || || |||||||| ||||| || | ||||| |||| || || Sbjct 198863 GACATCAAGAGCTGGCCTTTCAAGGTTATTGACCACAACGGTAACCCCATGATCGAGGTC 198804 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 || ||| | | || ||||| || || || | |||| ||| | ||||| || | Sbjct 198803 CAGTAC-CTTA-ACGAGACTAAGTCTTTCTCCCCCCAGGAAATCTCTGCCATGGTCTTGG 198746 Query 474687 CCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAG--TAACTGATGCAGTAA 474743 |||||||| ||| ||| ||| || | ||| | | ||||| | || | || || | Sbjct 198745 TTAAAATGAAGGAAATCGCTGAGGCCA-AGCTT-GCCCAGAAGGTTGAC-AAGGCTGTCA 198689 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | ||||| || || || || || || || || ||||| || ||||| ||||| || | Sbjct 198688 TCACTGTCCCTGCCTACTTCAACGACTCCCAGCGTCAGGCTACTAAGGATGCTGGTTCCA 198629 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 | || |||||||| ||| | ||||| || || || || || || || || ||||||| | Sbjct 198628 TCGCTGGTCTTAACGTTCTTCGTATCATCAACGAGCCTACCGCTGCTGCTATTGCTTACG 198569 Query 474864 GTCT 474867 |||| Sbjct 198568 GTCT 198565 >seq3 Length=255871 Score = 116 bits (128), Expect = 2e-20 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | ||||| || ||||| | || || |||| || || Sbjct 112806 ACGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGT 112747 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||||||| || || ||||| || |||||||||||||| ||||||||||| || Sbjct 112746 GCGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACC 112687 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||| || ||| || || || || ||||| || ||| || | | || || Sbjct 112686 TTCCTTATCACTAATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACCTCGAG 112627 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| ||||| || || || |||||||| | |||||| || Sbjct 112626 GGTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTG 112588 >seq23 Length=679897 Score = 93.3 bits (102), Expect = 3e-13 Identities = 121/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 ||||| || | ||||| | | || ||||| ||||| ||||| || |||||||| || Sbjct 614924 TTATACTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGC 614983 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||||||||| ||||||||||| ||||| || |||||||| || |||||| Sbjct 614984 TGGTCAGGAGGAATACCTTCCTTGTCGCTGATCTTGCTCTTCACAGCTTCGATGGTATCA 615043 Query 480714 GT-GTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTT 480757 | | | | |||||| || ||||| || ||||| | ||||| Sbjct 615044 TTAGACTCCA-CTTCAAGAGTGATAGTCTTTCCGGTCAAGGTCTT 615087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268175811306692