Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq12 161 6e-34
seq34 152 3e-31
seq66 127 1e-23
seq3 116 2e-20
seq23 93.3 3e-13
>seq12
Length=715620
Score = 161 bits (178), Expect = 6e-34
Identities = 376/555 (68%), Gaps = 14/555 (3%)
Strand=Plus/Plus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGT-TTGGCAAAATGGTAA 474387
||| |||| || ||||| || ||||| ||| ||||||||| || || || || |
Sbjct 374134 GCAGTTGGAATCGATTTGGGTACTACATACTCTTGTGTAGCCCACTTTGCTAA-TGACAG 374192
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| ||||| |||||||| || || ||||| | || || || || | ||| | || ||
Sbjct 374193 AGTTGAAATTATTGCCAACGATCAGGGTAACCGTACTACTCCTTCGTTCGTTGCCTTCAC 374252
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
||| ||||| | ||||||||| ||||| || || |||| ||||| || ||| |||
Sbjct 374253 TGACACTGAGCGTCTTATTGGTGATGCCGCCAAGAATCAGGCTGCCATGAACCCTTCTAA 374312
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACC-ACTGTCCAAT 474566
||| | || ||||| || | | ||||| ||||| | |||||| | | || |
Sbjct 374313 TACCGTCTTCGATGCCAAGCGTCTTATTGGCCGTAAGATGGATGATCCTGAGACTCAGAA 374372
Query 474567 CTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG 474626
| ||||| |||| ||||| ||||| || | ||| || || || |
Sbjct 374373 C-GATATTAAGCATTTCCCTTTCAAGGTTATTGACAAGAACAATAAGCCCGTCATTGAGG 374431
Query 474627 C--AATACACGCAGGTGAAACTAAACAATTTTCAC--CGGAACAAATTTCTTCAATGGTT 474682
|||||| | ||||| || || | |||||| | || | || ||||| ||||||
Sbjct 374432 TTGAATACAAG--GGTGAGACCAAG--ACTTTCACTCCTGAGGAGATCTCTTCCATGGTT 374487
Query 474683 TTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGT 474741
| |||| ||||| | || || ||| | || || || | || | | || ||
Sbjct 374488 CTCACCAAGATGAAGGAGACTGCTGAGGGC-TACCTCGGTGGTAAGGTTGATCAGGCCGT 374546
Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801
|||||||| || || || || || || || || ||||| || || || ||||| || |
Sbjct 374547 TATTACTGTCCCTGCTTACTTCAACGACTCCCAGCGTCAGGCTACCAAGGATGCCGGTAC 374606
Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861
||||| |||||||||||| | |||||||| ||||| || || || || || |||| ||
Sbjct 374607 TATTGCTGGTCTTAATGTTCTTCGTATTATCAATGAGCCTACCGCTGCTGCTATTGCCTA 374666
Query 474862 TGGTCTTGATAAGAA 474876
|||||||| |||||
Sbjct 374667 CGGTCTTGACAAGAA 374681
Score = 109 bits (120), Expect = 4e-18
Identities = 469/736 (64%), Gaps = 8/736 (1%)
Strand=Plus/Plus
Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546
||||||||||| ||||| || ||||||||||| || || |||||| ||||||| || ||
Sbjct 374902 CGTCTTAGAACCGCTTGCGAGCGTGCTAAGCGTGCCCTCTCTTCTTCTACTCAGACCCCT 374961
Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606
|||| |||| ||||||| || || ||||| | | ||| ||| || | ||
Sbjct 374962 ATTGAGATTGACTCTCTTTACGAGGGTATTGACTTCTACACTTCTATCACTCGTGCCCGT 375021
Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666
|| || || | || |||||||| | || || | || ||||| | ||| |
Sbjct 375022 TTCGAGGAGCTCTGCCAGGATCTCTTCCGTTCTACCATGGCCCCTGTTGAGAAGGTTTTG 375081
Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726
| ||| |||| | ||| || | || | || ||||| ||||| || ||||| ||
Sbjct 375082 AAGGATGCTAAGGTCTCCAAGTCTGATGTTAACGAGATTGTCCTTGTTGGTGGTTCTACT 375141
Query 475727 AGAAT-TCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGA 475785
| || |||| | ||| | | |||| | || |||||| |||| ||
Sbjct 375142 CGTATCCCCAAGGTTCAGA-AGCTCGTTTCTGACTTCTTCTCTGGTAAGGAGTTGAACCG 375200
Query 475786 AAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATC 475845
| | || |||||||| || ||||| || || || |||||||| || ||||| | |
Sbjct 375201 TTCTATCAACCCTGATGAGGCCGTTGCTTACGGTGCCGCTGTCCAGGCTGCTATCCTTAC 375260
Query 475846 AGGTCA---ATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTC 475902
||| | || | || ||| | | | | | ||| | || || |||| | ||
Sbjct 375261 TGGTGACACCTCTTCCAAG--ACTCAGGACT-TGTTGCTTCTCGATGTCGCTCCTTTGTC 375317
Query 475903 ATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTAT 475962
|| ||| |||| || | ||| || | || || ||||| |||||| | ||||
Sbjct 375318 TTTGGGTATTGAGACCGCTGGTGGCCAGTTCACCAAGCTTATCCCCAGAAACAGCACTAT 375377
Query 475963 CCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCAT 476022
|| ||| || || | | || || ||| | |||| || || | ||| ||
Sbjct 375378 TCCCACCAAGAAGTCTGAGATCTTCTCTACTGCTGCTGACAACCAGCCTGGTGTCTTGAT 375437
Query 476023 CCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAA 476082
||| |||| || ||||| | | ||| ||||| |||| || || | || |
Sbjct 375438 CCAGGTCTTCGAGGGTGAGCGTCCTCTTACTCGTGATAACAACATCCTCGGTAAGTTCGA 375497
Query 476083 TCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATAT 476142
||| ||||| || ||||| ||| | || |||||| || || ||||| || ||| |
Sbjct 375498 GCTTTCTGGTATCCCCCCTGCCCCCCGTGGTACTCCTCAGATCGAGGTTACCTTCGATGT 375557
Query 476143 TGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAGAGTAAAAA 476202
||||| || ||||||||||| || | ||| || ||||||| | ||| | | ||
Sbjct 375558 CGATGCTAACGGTATTCTTAACGTCTCCGCTGCCGACAAATCTACTGGTAAGTCTCAGAA 375617
Query 476203 TATAACTATTACAAAC 476218
|| ||||| || |||
Sbjct 375618 GATCACTATCACTAAC 375633
>seq34
Length=648589
Score = 152 bits (168), Expect = 3e-31
Identities = 369/551 (67%), Gaps = 11/551 (2%)
Strand=Plus/Plus
Query 474324 GAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATG 474383
|||||| ||||||||||||||||| || || ||| |||||||| |||| ||| |||
Sbjct 411697 GAATTGTTATTGGTATTGATTTAGGTACAACATACTCTTGTGTAGGTGTTATGCAGCATG 411756
Query 474384 GTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTT 474443
| | ||| ||||| ||||||| || || ||||| | | || || || || ||| |||
Sbjct 411757 GCAGAGTTGAAATTCTTGCCAACGATCAGGGTAACCGTATCACTCCTTCTTACGTTGCTT 411816
Query 474444 TTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTG 474503
| | || |||| | | |||| ||||||||||| |||| ||||| ||||| ||
Sbjct 411817 TCAAGGATGGCGAACGTTTGGTTGGTGATGCTGCTAAGAATCAGGCTGCCTCTAACGTTG 411876
Query 474504 TTAATACTATTTTTGATGCTAAAAGATTGATTGGTC-GTAATTTTGATGATACCACTGTC 474562
||||| ||||||||| || | | ||||||| | |||| || ||| | | ||||
Sbjct 411877 AAAATACCATTTTTGATATCAAGCGTATCATTGGTCTGAAATTCAGA-GATTCTAGTGTC 411935
Query 474563 CAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATA 474622
|| ||||| | | ||||| | || || | | | | ||||| | |
Sbjct 411936 CAGAAGGATATCAGAAGATTCCCTTTCACAGTTGTAGAGAAGGATAGCAAACCTGTTGTC 411995
Query 474623 GAAGCAATACACGCAGGTGAAACTAAACAATTTTCA--CCGGAACAAATTTCTTCAATGG 474680
||| | || || || | | || ||||| || || | || | | ||||
Sbjct 411996 CAAGTCAACTTCGACGGAGAGA--AGAC---TTTCACTCCTGAGGAGATCAGTGCCATGG 412050
Query 474681 TTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCA 474739
|||| | || ||||| || | || ||| | ||||| || | | || ||| ||||
Sbjct 412051 TTTTGGGTAAGATGAAGCAGATTGCTGAGGAC-TATCTCGGTGAGAAGGTCACTCATGCT 412109
Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799
|| | ||||| || || || ||||||||| |||| ||||| || || || ||||| ||
Sbjct 412110 GTTGTCACTGTCCCTGCCTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGT 412169
Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859
| ||||| ||| | | |||| | ||| | | ||||| || || || ||||| ||||
Sbjct 412170 ACTATTGCCGGTTTGACTGTTCTTCGTGTCGTCAATGAGCCTACTGCTGCCGCTATTGCC 412229
Query 474860 TATGGTCTTGA 474870
|| ||||||||
Sbjct 412230 TACGGTCTTGA 412240
Score = 87.8 bits (96), Expect = 1e-11
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || ||||||| || || || || ||||||||||| ||||||||||| || ||||
Sbjct 581017 ATGCCGTTGTTACTGTCCCCGCTTACTTCAATGATTCTCAGCGTCAAGCAACCAAGGATG 581076
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| || |||| ||| | || ||||| | || |||| || || || || || ||
Sbjct 581077 CTGGCCAGATTGTCGGTTTGAACGTTTTGAGAGTTGTTAACGAGCCCACCGCTGCTGCTT 581136
Query 474855 TTGCTTATGGTCTTGATAAGA 474875
| ||||| |||||||| ||||
Sbjct 581137 TGGCTTACGGTCTTGAGAAGA 581157
>seq66
Length=396251
Score = 127 bits (140), Expect = 1e-23
Identities = 362/544 (67%), Gaps = 13/544 (2%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388
|| || || |||||||| || || || ||| ||||| || || | || | |
Sbjct 199100 GCCATCGGCATTGATTTGGGCACCACATACTCGTGTGTCGCCACTTACGAGAACGCT--- 199044
Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448
|| || || || || ||||| ||||||||| | || || || | |||| |||| |||
Sbjct 199043 GTCGAGATCATCGCTAATGAGCAAGGTAATCGTGTGACTCCTTCCTTTGTTGCTTTCACT 198984
Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508
|| | || | ||||||||| ||||||||||| |||| ||||| ||| || ||
Sbjct 198983 GATAAGGAGCGTCTTATTGGTGATGCTGCTAAGAATCAGGCTGCTCTTAACCCCCGCAAC 198924
Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568
||| |||| |||||||| | | ||||| ||| ||| || ||| ||| |||||
Sbjct 198923 ACTGTTTTCGATGCTAAGCGTCTCATTGGCCGTCGTTTCGACGATGCCAACGTCCAGCAG 198864
Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAA-ACCAT-ATATAGAAG 474626
|| || |||||||| ||||| || | ||||| |||| || ||
Sbjct 198863 GACATCAAGAGCTGGCCTTTCAAGGTTATTGACCACAACGGTAACCCCATGATCGAGGTC 198804
Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686
|| ||| | | || ||||| || || || | |||| ||| | ||||| || |
Sbjct 198803 CAGTAC-CTTA-ACGAGACTAAGTCTTTCTCCCCCCAGGAAATCTCTGCCATGGTCTTGG 198746
Query 474687 CCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAG--TAACTGATGCAGTAA 474743
|||||||| ||| ||| ||| || | ||| | | ||||| | || | || || |
Sbjct 198745 TTAAAATGAAGGAAATCGCTGAGGCCA-AGCTT-GCCCAGAAGGTTGAC-AAGGCTGTCA 198689
Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803
| ||||| || || || || || || || || ||||| || ||||| ||||| || |
Sbjct 198688 TCACTGTCCCTGCCTACTTCAACGACTCCCAGCGTCAGGCTACTAAGGATGCTGGTTCCA 198629
Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863
| || |||||||| ||| | ||||| || || || || || || || || ||||||| |
Sbjct 198628 TCGCTGGTCTTAACGTTCTTCGTATCATCAACGAGCCTACCGCTGCTGCTATTGCTTACG 198569
Query 474864 GTCT 474867
||||
Sbjct 198568 GTCT 198565
>seq3
Length=255871
Score = 116 bits (128), Expect = 2e-20
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||||||||| || | ||||| || ||||| | || || |||| || ||
Sbjct 112806 ACGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGT 112747
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||||||||| || || ||||| || |||||||||||||| ||||||||||| ||
Sbjct 112746 GCGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACC 112687
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
|||||| || ||| || || || || ||||| || ||| || | | || ||
Sbjct 112686 TTCCTTATCACTAATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACCTCGAG 112627
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| ||||| || || || |||||||| | |||||| ||
Sbjct 112626 GGTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTG 112588
>seq23
Length=679897
Score = 93.3 bits (102), Expect = 3e-13
Identities = 121/165 (73%), Gaps = 2/165 (1%)
Strand=Plus/Plus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
||||| || | ||||| | | || ||||| ||||| ||||| || |||||||| ||
Sbjct 614924 TTATACTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGC 614983
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| ||||||||||| ||||||||||| ||||| || |||||||| || ||||||
Sbjct 614984 TGGTCAGGAGGAATACCTTCCTTGTCGCTGATCTTGCTCTTCACAGCTTCGATGGTATCA 615043
Query 480714 GT-GTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTT 480757
| | | | |||||| || ||||| || ||||| | |||||
Sbjct 615044 TTAGACTCCA-CTTCAAGAGTGATAGTCTTTCCGGTCAAGGTCTT 615087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268175811306692
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |