Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq10 138 1e-27 >seq10 Length=187202 Score = 138 bits (152), Expect = 1e-27 Identities = 187/259 (72%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 ||| | | |||||| || | ||||| | |||| ||||| || | |||||||| || Sbjct 23501 CCAGCCGAACCATGGTAAACCGCATACATAGCAGAGATATTGGCTAAAAGTGCTTGCGCA 23442 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 || || || || || ||||| |||||||||||||||||||||||||||||||| || Sbjct 23441 GTACAAATATTCGAAGTAGCTTTATCTCTTCTAATATGCTGCTCTCTAGTTTGTAGAGCA 23382 Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCC--ACTGACTGACCTACAATTCTGCCAGGTA 139440 | |||||| ||||||| || || ||| || || || | |||||| || || | Sbjct 23381 AGTCTGTAGGCAGGATCACCCAATCTATCCTTGCTCAC--GCCGATAATTCTACCTGGAA 23324 Query 139441 TCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCA 139500 | |||| ||| | | ||| | || || || ||||||||||||||||| |||||| Sbjct 23323 TTTTTCGTTTAAATTCATCTTTAACGGCGAAAAAACCAGCATGAGGACCTCCGAATCCCA 23264 Query 139501 TAGGAATACCAAACCTTTG 139519 |||| | ||||| || || Sbjct 23263 TAGGGACTCCAAATCTCTG 23245 Score = 100 bits (110), Expect = 3e-16 Identities = 158/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 139853 TAACAGCATTGCCTC-TGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTG 139911 ||| | ||| || || ||| || || ||||||||||| | || || ||||| || || Sbjct 22920 TAAAACCATAGCTTCCTGC-GCAGCTGTTGCTTCATCAAGTAATGAAGCGTTGGCGATAT 22862 Query 139912 GTAATCCTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCT 139971 | || || || || || | | ||||||| |||||| ||| | || | || || | Sbjct 22861 CCATACCAGTTAGATCAGTTACCATCGTTTGGAAATTGAGTAATGACTCAAGCCTGCCTT 22802 Query 139972 GAGATATCTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGT 140031 ||||||| || | |||||| ||||| ||| || ||||| ||||||||||||| | || Sbjct 22801 GAGATATTTCTGGTTGATAAGGAGTATAACTGGTATACCAGTTAGGATTCTCAAGCAAGT 22742 Query 140032 TTCGCTGTATGAC-TGGGGGTGTAATGGTTCCATAGTATCC 140071 ||||| ||||| | || ||| | ||||||||||| || Sbjct 22741 TTCGCAAAATGACGTTTGGAAGTA-TCGTTCCATAGTAACC 22702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997828239080