Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq66 219 1e-51
seq16 113 1e-19
seq34 102 2e-16
seq17 102 2e-16
>seq66
Length=396251
Score = 219 bits (242), Expect = 1e-51
Identities = 631/961 (66%), Gaps = 25/961 (3%)
Strand=Plus/Plus
Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAAT 155641
||| ||| || |||||||||||||| ||||| |||| | | | ||| || || ||
Sbjct 306770 AGAGCAACTGAAGCCAGATTACATACAGCAGTTTCCTCAGGACTAGA-GTACTCAACGAT 306828
Query 155642 CTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTT 155701
|||||||||| |||||||||||||| || || | ||| ||| ||| || | |||
Sbjct 306829 TTCACAGCACAAATTAGAACTCTTGATAGTACCAAGATTACGCTGATTACTCTTGCGGTT 306888
Query 155702 ACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTT 155761
| |||||| || || ||| | || | |||||||| | || || |||| |||
Sbjct 306889 AGCCTGATCCTTATAAAGCATGAAAGGATTACCTGTCTCAGTTTGAGCTTCCAAAATGGC 306948
Query 155762 TAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATAT-TTCA 155820
||| || | | || |||| | || | | |||| || |||| ||||
Sbjct 306949 GTACCAAAGCTTCTGAGC-----TTTGATGGTACGA-CGACCTTT--ACCCATACGTTCA 307000
Query 155821 TA-------TACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTA 155873
|| || ||| | | | || ||||| ||| |||| || |||||||| |
Sbjct 307001 TAACGTGTGTAAAGCTCTTCGAATTCATCACCATAAACATCAGCAAGACCAGGGCATTCG 307060
Query 155874 TCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTC 155933
| ||| || | || | ||| | || | | || | || ||| |||| |||
Sbjct 307061 TTGGGACACATCAATGTCCACTCTCCATCAGACTTAACTCTCTTCATGAATAAGTCAGGA 307120
Query 155934 GCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT--CATCGCCGTGATTCTTCC 155991
||||| ||| | || || || | || |||| || | | | ||| ||||| |
Sbjct 307121 ATCCAAAGAGCCAAAAACAGATCACGGGCACG-GACTTCTTCCTTACCAGTG-TTCTTAC 307178
Query 155992 GTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTAC 156051
| || || | ||| || || |||| ||| || || ||||| ||||| ||| ||
Sbjct 307179 GAAGATCGATGAAGTCAAAAACATCATCATGCCAGGGTTCAAGATAAATAGCGAAAGCAC 307238
Query 156052 CATTCC---TCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCA 156108
| | | |||||||||||||| ||||| |||||||| ||||||||||||| ||||
Sbjct 307239 CTGGACGTTTGTTGCCACCCTGATCAACATAACGAGCAGTGTTATTGAAGACACGAAGCA 307298
Query 156109 TAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAA 156168
| |||| |||||| ||||| || || || || ||| || | ||||||| | || |
Sbjct 307299 TTGGAAGAATACCGTTGGATGTACCGTTAGTACCGGCGATGTAAGAACCAGTGGCACGGA 307358
Query 156169 CATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTA 156228
||| |||| || || ||||||||||| | |||||||||| |||| || ||||
Sbjct 307359 TATTGTGAACATTAAGACCAATACCACCAGCAGATTTAGAAATAAGAGCACAAGATTTTA 307418
Query 156229 CAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTA 156288
|||| |||| || || ||||| || |||| ||| | | || | |||||||| |
Sbjct 307419 GGGTATCATAAATGCCATCGATAGAGTCGTCTTTCATGCAAACAAGGAAACACGAACTCA 307478
Query 156289 ATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTAT 156348
|||||||| || || || || ||| | | || || | || || | || ||||| |
Sbjct 307479 TTTGAGGTCTGGGAGTACCGGCATTGTACAAAGTGGGAGAAGCGTGGGTGAAGTACTTGT 307538
Query 156349 TAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAG 156408
| ||||| | |||||||| || | | ||| | ||| | || || |||| ||||
Sbjct 307539 TGGACATCAAGTCGTATGTTTCGATGACCTTAGGGATGTTAAAACCATGGATACCAATAG 307598
Query 156409 AGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGT 156468
|| ||||| ||||||||| ||||| || || || |||| || | ||| | ||
Sbjct 307599 CAACTCTCATGATCATATGCTGTGGACGTTCGTGAACAACACCATTAAGTTTCAGCAAGT 307658
Query 156469 ATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAA 156528
| | ||| | || ||||| || ||||| |||| | |||||||| | |||||| |
Sbjct 307659 AAGAGCGCTGCAATGTTTTGAAACCGAAGTAATTGTATTTGAAATCACGCTGGTAATCGA 307718
Query 156529 T 156529
|
Sbjct 307719 T 307719
Score = 84.2 bits (92), Expect = 6e-11
Identities = 121/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 380959 CAGAATGTAAAAATCTGGAATGGTAATGGTAGTCGTGAGTTTTTAGATTCCCGTGGTCTA 381018
|||||| | | || ||| |||| ||||| ||||| || || | ||| | |||||
Sbjct 5059 CAGAATATCCATATTTGGGATGGCAATGGAAGTCGCGAATTCCTTGATAAAAGAGGTCTT 5000
Query 381019 ACCAATAACGAAGAAGATGACCTTGGTCCTATTTACGGATTTCAGTGGAGACATTTTAAC 381078
|| |||| || | |||| | || ||| ||||||||||||||||| | || ||
Sbjct 4999 ACTTCTAACCGTGAGGGTGACTTGGGACCTGTTTACGGATTTCAGTGGCGTCACTTCGGT 4940
Query 381079 GCCGATTATGATAATTGTGATAGTGATTATACTGGTAAGGGTGTCGACCAG 381129
|| |||||| |||||| |||||||||||| || ||| ||||||||
Sbjct 4939 GCTGATTATCTCGGATGTGATGCTGATTATACTGGAAAAGGTATCGACCAG 4889
>seq16
Length=115662
Score = 113 bits (124), Expect = 1e-19
Identities = 210/306 (69%), Gaps = 2/306 (1%)
Strand=Plus/Minus
Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631
|| |||| | ||| | ||||| || ||||||||||| ||| || |||||| || ||
Sbjct 18915 TCCTCCAAAGCCTTTACCAAACGTCGTTGAATATAACCTGTTTCAGCTGTTTTGACGGCA 18856
Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691
||||| || | ||| ||||||| |||| ||||||||||| | |||| || |||
Sbjct 18855 GTATCGATCAAACCTTCACGACCTGCCATTGCATGGAAGAAGAATTCTTGAGGGGTTAGT 18796
Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTG-GT 302750
|| | || | |||| | || || || || | ||| || || | || | | | ||
Sbjct 18795 CCTCTAAGATAGGAATTTTCGACAAATCCCTTTGACTCCGGAGAGTAATC-ATCACGCGT 18737
Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810
|| || ||||| || |||| || |||| || | ||||||||| || ||||| ||||
Sbjct 18736 GAAATGAGGCAGAGTTCTGTCAACAAAGCCATAAGCGATACGCTTACCTTCAACAATCTG 18677
Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAGCATT 302870
||| || | || | ||||||||| || || | | | ||||| || |||| | |
Sbjct 18676 CTGACCAACACAGGCTGACATCTGCGAGATGTTAATAAAAGAACCCTTTGATCCAGAACT 18617
Query 302871 TACCAT 302876
||||||
Sbjct 18616 TACCAT 18611
>seq34
Length=648589
Score = 102 bits (112), Expect = 2e-16
Identities = 336/511 (66%), Gaps = 16/511 (3%)
Strand=Plus/Minus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|||||||| | |||||||||||||||||||||||| ||||| || | ||||||||| |
Sbjct 145834 GCACCGTGCGCAATCATACAATCACGCTCCATTTCTCCGAATCGCAAACCACCATCTCTC 145775
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
| | ||| ||| | ||||| | ||| || | || || || | ||| |||
Sbjct 145774 GAACGACCTTCGACCGGCTGTCTAGTAAGGATCTGCACCGGGCCACGAGCACGGGCATGG 145715
Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCTC 251664
|||||| | ||||||||| | || | ||||||| | | || |||| ||| | ||
Sbjct 145714 ATCTTATCGTCTACCATATGTCTCAGTCTCTGGTAGTACGTAGGTCCGAAGAA-ACACTG 145656
Query 251665 G--AAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTCAT 251722
| || | |||| ||||| || |||| ||||| || || ||| | |
Sbjct 145655 GGCAACGAGCTTGCGA-CCAGTGTGACCGTTGTACATGACCTCAAAGCCACGGCTCTGGT 145597
Query 251723 AACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGGTGC 251782
||||| | | ||||| | | || | || ||| | | | | | || |||
Sbjct 145596 AACCATGCTCACGTAGCAGTTTACTAACAGCATCAACGGTAACCTCGGTGAATGGCGTGG 145537
Query 251783 CGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTA-AAAGTGT---CTCTTTCAGT 251838
|||| || | | ||| || | ||||| | || ||||| ||| |||
Sbjct 145536 CGTCACCCTCCAAACCAGA--GAGTG--CACTTACCTTAGAAAGTAAACACTCGATCAAA 145481
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
||||||| |||||||| || ||||| || || ||||| || | || || ||
Sbjct 145480 TGGGCGACTGTCATACGTGAAGGGATAGCGTGTGGGTTGATAATTAGATCCGGAACAAGA 145421
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAATGT--TTCCAATAGTTCCCTTTT 251956
|| || ||||||||||||||||||| | | || ||| | ||||| || ||||| |
Sbjct 145420 CCCTCGGCAGTGAAGGGCATATCCTCATGG-CGGTA-TGTAATACCAATGGTACCCTTCT 145363
Query 251957 GTCCGTGACGAGAACTGAACTTATCACCAAT 251987
| |||||||||||| |||||||||||||||
Sbjct 145362 GACCGTGACGAGAAGCGAACTTATCACCAAT 145332
>seq17
Length=111788
Score = 102 bits (112), Expect = 2e-16
Identities = 231/342 (68%), Gaps = 4/342 (1%)
Strand=Plus/Plus
Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089
|||| |||||| || || || || || | | |||||| | || ||| || |||||
Sbjct 103267 CCAATAGCATCGATCTCATCTATAAACACAATCGACGGAGCCTCTTTTCTGGCGGTTGCA 103326
Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149
|| | || | || | || || || | ||| ||| ||||||||||||| || ||| |
Sbjct 103327 AAAAGATCGCGAACCCTAGAGGCACCGACACCTACAAACATTTCTACAAACTCCGAACCA 103386
Query 289150 GATACT-TGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
|| |||| || | || |||||| || ||| || | || || | |||||
Sbjct 103387 CTAACGCTGAAAAAAGGC-ACGCCTGCTTCACCAGCTGTAGCTTTTGCAAGCATAGTCTT 103445
Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCAGACT 289267
|||||||||||| || ||| ||| | | | || ||| | |||||| ||||| ||
Sbjct 103446 ACCTGTTCCAGGCGGGCCCGATAAGATAGCACCTCGTGGGATTTTTGCACCCAG-TTTCT 103504
Query 289268 TATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327
||| || | || ||| ||||| ||||||| ||| || |||| ||| |||||||
Sbjct 103505 CATACTTTTGGGGTACCTTCAAAAACTCTACAAACTCCATAATTTCAGCTTTGGCCTCAT 103564
Query 289328 CACATCCTGCTACATCAGCAAAAGTAATATTAATATCGTTCT 289369
|| ||| || || || ||||| |||| |||| || ||||
Sbjct 103565 CAGCTCCAGCGACGTCGGCAAACTTAATTTTAACGTCTTTCT 103606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816110244623
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |