Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq66 219 1e-51 seq16 113 1e-19 seq34 102 2e-16 seq17 102 2e-16 >seq66 Length=396251 Score = 219 bits (242), Expect = 1e-51 Identities = 631/961 (66%), Gaps = 25/961 (3%) Strand=Plus/Plus Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAAT 155641 ||| ||| || |||||||||||||| ||||| |||| | | | ||| || || || Sbjct 306770 AGAGCAACTGAAGCCAGATTACATACAGCAGTTTCCTCAGGACTAGA-GTACTCAACGAT 306828 Query 155642 CTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTT 155701 |||||||||| |||||||||||||| || || | ||| ||| ||| || | ||| Sbjct 306829 TTCACAGCACAAATTAGAACTCTTGATAGTACCAAGATTACGCTGATTACTCTTGCGGTT 306888 Query 155702 ACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTT 155761 | |||||| || || ||| | || | |||||||| | || || |||| ||| Sbjct 306889 AGCCTGATCCTTATAAAGCATGAAAGGATTACCTGTCTCAGTTTGAGCTTCCAAAATGGC 306948 Query 155762 TAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATAT-TTCA 155820 ||| || | | || |||| | || | | |||| || |||| |||| Sbjct 306949 GTACCAAAGCTTCTGAGC-----TTTGATGGTACGA-CGACCTTT--ACCCATACGTTCA 307000 Query 155821 TA-------TACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTA 155873 || || ||| | | | || ||||| ||| |||| || |||||||| | Sbjct 307001 TAACGTGTGTAAAGCTCTTCGAATTCATCACCATAAACATCAGCAAGACCAGGGCATTCG 307060 Query 155874 TCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTC 155933 | ||| || | || | ||| | || | | || | || ||| |||| ||| Sbjct 307061 TTGGGACACATCAATGTCCACTCTCCATCAGACTTAACTCTCTTCATGAATAAGTCAGGA 307120 Query 155934 GCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT--CATCGCCGTGATTCTTCC 155991 ||||| ||| | || || || | || |||| || | | | ||| ||||| | Sbjct 307121 ATCCAAAGAGCCAAAAACAGATCACGGGCACG-GACTTCTTCCTTACCAGTG-TTCTTAC 307178 Query 155992 GTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTAC 156051 | || || | ||| || || |||| ||| || || ||||| ||||| ||| || Sbjct 307179 GAAGATCGATGAAGTCAAAAACATCATCATGCCAGGGTTCAAGATAAATAGCGAAAGCAC 307238 Query 156052 CATTCC---TCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCA 156108 | | | |||||||||||||| ||||| |||||||| ||||||||||||| |||| Sbjct 307239 CTGGACGTTTGTTGCCACCCTGATCAACATAACGAGCAGTGTTATTGAAGACACGAAGCA 307298 Query 156109 TAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAA 156168 | |||| |||||| ||||| || || || || ||| || | ||||||| | || | Sbjct 307299 TTGGAAGAATACCGTTGGATGTACCGTTAGTACCGGCGATGTAAGAACCAGTGGCACGGA 307358 Query 156169 CATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTA 156228 ||| |||| || || ||||||||||| | |||||||||| |||| || |||| Sbjct 307359 TATTGTGAACATTAAGACCAATACCACCAGCAGATTTAGAAATAAGAGCACAAGATTTTA 307418 Query 156229 CAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTA 156288 |||| |||| || || ||||| || |||| ||| | | || | |||||||| | Sbjct 307419 GGGTATCATAAATGCCATCGATAGAGTCGTCTTTCATGCAAACAAGGAAACACGAACTCA 307478 Query 156289 ATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTAT 156348 |||||||| || || || || ||| | | || || | || || | || ||||| | Sbjct 307479 TTTGAGGTCTGGGAGTACCGGCATTGTACAAAGTGGGAGAAGCGTGGGTGAAGTACTTGT 307538 Query 156349 TAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAG 156408 | ||||| | |||||||| || | | ||| | ||| | || || |||| |||| Sbjct 307539 TGGACATCAAGTCGTATGTTTCGATGACCTTAGGGATGTTAAAACCATGGATACCAATAG 307598 Query 156409 AGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGT 156468 || ||||| ||||||||| ||||| || || || |||| || | ||| | || Sbjct 307599 CAACTCTCATGATCATATGCTGTGGACGTTCGTGAACAACACCATTAAGTTTCAGCAAGT 307658 Query 156469 ATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAA 156528 | | ||| | || ||||| || ||||| |||| | |||||||| | |||||| | Sbjct 307659 AAGAGCGCTGCAATGTTTTGAAACCGAAGTAATTGTATTTGAAATCACGCTGGTAATCGA 307718 Query 156529 T 156529 | Sbjct 307719 T 307719 Score = 84.2 bits (92), Expect = 6e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 380959 CAGAATGTAAAAATCTGGAATGGTAATGGTAGTCGTGAGTTTTTAGATTCCCGTGGTCTA 381018 |||||| | | || ||| |||| ||||| ||||| || || | ||| | ||||| Sbjct 5059 CAGAATATCCATATTTGGGATGGCAATGGAAGTCGCGAATTCCTTGATAAAAGAGGTCTT 5000 Query 381019 ACCAATAACGAAGAAGATGACCTTGGTCCTATTTACGGATTTCAGTGGAGACATTTTAAC 381078 || |||| || | |||| | || ||| ||||||||||||||||| | || || Sbjct 4999 ACTTCTAACCGTGAGGGTGACTTGGGACCTGTTTACGGATTTCAGTGGCGTCACTTCGGT 4940 Query 381079 GCCGATTATGATAATTGTGATAGTGATTATACTGGTAAGGGTGTCGACCAG 381129 || |||||| |||||| |||||||||||| || ||| |||||||| Sbjct 4939 GCTGATTATCTCGGATGTGATGCTGATTATACTGGAAAAGGTATCGACCAG 4889 >seq16 Length=115662 Score = 113 bits (124), Expect = 1e-19 Identities = 210/306 (69%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 || |||| | ||| | ||||| || ||||||||||| ||| || |||||| || || Sbjct 18915 TCCTCCAAAGCCTTTACCAAACGTCGTTGAATATAACCTGTTTCAGCTGTTTTGACGGCA 18856 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 ||||| || | ||| ||||||| |||| ||||||||||| | |||| || ||| Sbjct 18855 GTATCGATCAAACCTTCACGACCTGCCATTGCATGGAAGAAGAATTCTTGAGGGGTTAGT 18796 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTG-GT 302750 || | || | |||| | || || || || | ||| || || | || | | | || Sbjct 18795 CCTCTAAGATAGGAATTTTCGACAAATCCCTTTGACTCCGGAGAGTAATC-ATCACGCGT 18737 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 || || ||||| || |||| || |||| || | ||||||||| || ||||| |||| Sbjct 18736 GAAATGAGGCAGAGTTCTGTCAACAAAGCCATAAGCGATACGCTTACCTTCAACAATCTG 18677 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAGCATT 302870 ||| || | || | ||||||||| || || | | | ||||| || |||| | | Sbjct 18676 CTGACCAACACAGGCTGACATCTGCGAGATGTTAATAAAAGAACCCTTTGATCCAGAACT 18617 Query 302871 TACCAT 302876 |||||| Sbjct 18616 TACCAT 18611 >seq34 Length=648589 Score = 102 bits (112), Expect = 2e-16 Identities = 336/511 (66%), Gaps = 16/511 (3%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | |||||||||||||||||||||||| ||||| || | ||||||||| | Sbjct 145834 GCACCGTGCGCAATCATACAATCACGCTCCATTTCTCCGAATCGCAAACCACCATCTCTC 145775 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 | | ||| ||| | ||||| | ||| || | || || || | ||| ||| Sbjct 145774 GAACGACCTTCGACCGGCTGTCTAGTAAGGATCTGCACCGGGCCACGAGCACGGGCATGG 145715 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCTC 251664 |||||| | ||||||||| | || | ||||||| | | || |||| ||| | || Sbjct 145714 ATCTTATCGTCTACCATATGTCTCAGTCTCTGGTAGTACGTAGGTCCGAAGAA-ACACTG 145656 Query 251665 G--AAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTCAT 251722 | || | |||| ||||| || |||| ||||| || || ||| | | Sbjct 145655 GGCAACGAGCTTGCGA-CCAGTGTGACCGTTGTACATGACCTCAAAGCCACGGCTCTGGT 145597 Query 251723 AACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGGTGC 251782 ||||| | | ||||| | | || | || ||| | | | | | || ||| Sbjct 145596 AACCATGCTCACGTAGCAGTTTACTAACAGCATCAACGGTAACCTCGGTGAATGGCGTGG 145537 Query 251783 CGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTA-AAAGTGT---CTCTTTCAGT 251838 |||| || | | ||| || | ||||| | || ||||| ||| ||| Sbjct 145536 CGTCACCCTCCAAACCAGA--GAGTG--CACTTACCTTAGAAAGTAAACACTCGATCAAA 145481 Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||||||| |||||||| || ||||| || || ||||| || | || || || Sbjct 145480 TGGGCGACTGTCATACGTGAAGGGATAGCGTGTGGGTTGATAATTAGATCCGGAACAAGA 145421 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAATGT--TTCCAATAGTTCCCTTTT 251956 || || ||||||||||||||||||| | | || ||| | ||||| || ||||| | Sbjct 145420 CCCTCGGCAGTGAAGGGCATATCCTCATGG-CGGTA-TGTAATACCAATGGTACCCTTCT 145363 Query 251957 GTCCGTGACGAGAACTGAACTTATCACCAAT 251987 | |||||||||||| ||||||||||||||| Sbjct 145362 GACCGTGACGAGAAGCGAACTTATCACCAAT 145332 >seq17 Length=111788 Score = 102 bits (112), Expect = 2e-16 Identities = 231/342 (68%), Gaps = 4/342 (1%) Strand=Plus/Plus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 |||| |||||| || || || || || | | |||||| | || ||| || ||||| Sbjct 103267 CCAATAGCATCGATCTCATCTATAAACACAATCGACGGAGCCTCTTTTCTGGCGGTTGCA 103326 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || | || | || | || || || | ||| ||| ||||||||||||| || ||| | Sbjct 103327 AAAAGATCGCGAACCCTAGAGGCACCGACACCTACAAACATTTCTACAAACTCCGAACCA 103386 Query 289150 GATACT-TGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || |||| || | || |||||| || ||| || | || || | ||||| Sbjct 103387 CTAACGCTGAAAAAAGGC-ACGCCTGCTTCACCAGCTGTAGCTTTTGCAAGCATAGTCTT 103445 Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCAGACT 289267 |||||||||||| || ||| ||| | | | || ||| | |||||| ||||| || Sbjct 103446 ACCTGTTCCAGGCGGGCCCGATAAGATAGCACCTCGTGGGATTTTTGCACCCAG-TTTCT 103504 Query 289268 TATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327 ||| || | || ||| ||||| ||||||| ||| || |||| ||| ||||||| Sbjct 103505 CATACTTTTGGGGTACCTTCAAAAACTCTACAAACTCCATAATTTCAGCTTTGGCCTCAT 103564 Query 289328 CACATCCTGCTACATCAGCAAAAGTAATATTAATATCGTTCT 289369 || ||| || || || ||||| |||| |||| || |||| Sbjct 103565 CAGCTCCAGCGACGTCGGCAAACTTAATTTTAACGTCTTTCT 103606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816110244623