Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq34 113 4e-20
seq23 98.7 9e-16
seq66 84.2 2e-11
seq22 82.4 7e-11
>seq34
Length=648589
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || || || ||| | || || || |||||||| ||||| || || | |
Sbjct 446543 ATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCTAAT 446484
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||| ||||| ||||| || ||||| || ||
Sbjct 446483 GACACCATCGAGGCTGTCAAAAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGACCAG 446424
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||||||||||| || || |||||||| |||||| | | | | || || || |||
Sbjct 446423 CAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTTTCTGACTACAAC 446364
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| || || | |||||||||
Sbjct 446363 ATCCAGAAGGAGTCCACTATTCACTTGGTG 446334
>seq23
Length=679897
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||||| || || | ||||| || ||||| || || ||||| || | |
Sbjct 615102 ATGCAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAGTCTAAT 615043
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | ||| | || || |||||| ||||| ||||| || ||||| || ||
Sbjct 615042 GATACCATCGAAGCTGTGAAGAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGACCAG 614983
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||||| ||||| | | | || || ||||||
Sbjct 614982 CAGCGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTATAAC 614923
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || || ||||| | || ||||| || ||
Sbjct 614922 ATCCAGAAGGAGTCCACTCTGCATTTGGTTCTCCGTTTGCGTGGTGG 614876
>seq66
Length=396251
Score = 84.2 bits (92), Expect = 2e-11
Identities = 388/606 (64%), Gaps = 26/606 (4%)
Strand=Plus/Plus
Query 138157 TCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCCGTT 138216
|| || || |||| || || |||| || | | || | |||||||||||| || |||
Sbjct 305855 TCAACCGTGAACTGAATAGCGGCAGCTGCGGCCTGAGTGCGCAGATAATACATACCAGTT 305914
Query 138217 TTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAGTCGGTTT 138275
|| || || || ||| |||| | || || |||||| | || | || | ||
Sbjct 305915 TTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTACCCATAGTTGGGGCC 305974
Query 138276 CGCCAG-AAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCA 138334
|| | |||||| | |||| | ||||||| || ||||||| || ||| | ||||
Sbjct 305975 TGCATGTAAATAT-TCAAACTCT-GACTCTGGTCAATGAAAGGACCACGAGCGGCAGCCA 306032
Query 138335 TGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATGTC 138394
| | ||| | | || | || ||||| ||||||||||||||||| |||||
Sbjct 306033 TATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAATATCCT 306092
Query 138395 GCGGTATTGTTGCAATATTTTGAATG----CTCCCGTTGGCCGCAATGATGCGATTTCTC 138450
| || || | || || | || ||| | || ||| |||| | | ||| ||
Sbjct 306093 GAGGAATCGAGGCGATGTCTTTAATAGAACCACCACTTG----CAATCAATCTATTCTTC 306148
Query 138451 ATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACC 138510
|| |||||||| | ||| || | | | ||| || | ||||| || | ||
Sbjct 306149 ATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACGATT 306208
Query 138511 TGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGAT 138570
|| |||||||| ||||| |||| | | ||| | ||| |||||||||||| || ||
Sbjct 306209 TGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAACAT 306268
Query 138571 TCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAA 138630
|| |||| || | || |||| || | || || ||||| || || | ||| |||
Sbjct 306269 TCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGGGAA 306328
Query 138631 TTCCGTAAACCGTGAAGCTTGA-TTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCT 138689
|| || ||||| | ||||| ||| | || | | |||||||||||| || |
Sbjct 306329 TTACGCAAACCATACTTCTTGAGATCG-GCTTTCAAAGTATCCCAGTCCCACAAGTCAGT 306387
Query 138690 AGGTTTTTTGTTCCACATATCGTA------CTGTAACATTCCCAAACTTGCGGGACTGCC 138743
|||| | | ||| | |||||| ||| || |||| || || ||||||||
Sbjct 306388 AGGTGTAACGCCCCAAAGATCGTAGGAAAGCTG--ACCTTCCGAA----GCAGGACTGCC 306441
Query 138744 TTCGTA 138749
||||||
Sbjct 306442 TTCGTA 306447
>seq22
Length=83673
Score = 82.4 bits (90), Expect = 7e-11
Identities = 115/160 (72%), Gaps = 6/160 (4%)
Strand=Plus/Plus
Query 126031 GTCGCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAtttttttt 126090
||||| ||||| || || || || || ||||| || ||||| |||||||| |
Sbjct 16683 GTCGCATTCGCAGCTGTTGAGGGTGTTTTCTTCTCAGGATCCTTTGCTGCTATTTTCTGG 16742
Query 126091 ATAAAGACAAAGGGTA---TAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGT 126147
| || |||| || | ||||| ||| | || ||||| ||||||||||||||||||
Sbjct 16743 CTCAA---AAAGCGTGGCCTTATGCCGGGTTTGACCTTCAGTAACGAGTTGATTTCTCGT 16799
Query 126148 GACGAAGGACTCCATACGGACTTTGCATGTCTGTATTACA 126187
||||| || || ||||| || || || ||||| |||||
Sbjct 16800 GACGAGGGTCTTCATACCGATTTCGCTTGTCTCCTTTACA 16839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897155726120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |