Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq34 113 4e-20 seq23 98.7 9e-16 seq66 84.2 2e-11 seq22 82.4 7e-11 >seq34 Length=648589 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || || || ||| | || || || |||||||| ||||| || || | | Sbjct 446543 ATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCTAAT 446484 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||| ||||| ||||| || ||||| || || Sbjct 446483 GACACCATCGAGGCTGTCAAAAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGACCAG 446424 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| || || |||||||| |||||| | | | | || || || ||| Sbjct 446423 CAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTTTCTGACTACAAC 446364 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| || || | ||||||||| Sbjct 446363 ATCCAGAAGGAGTCCACTATTCACTTGGTG 446334 >seq23 Length=679897 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||||| || || | ||||| || ||||| || || ||||| || | | Sbjct 615102 ATGCAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAGTCTAAT 615043 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | ||| | || || |||||| ||||| ||||| || ||||| || || Sbjct 615042 GATACCATCGAAGCTGTGAAGAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGACCAG 614983 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| ||||| | | | || || |||||| Sbjct 614982 CAGCGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTATAAC 614923 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || || ||||| | || ||||| || || Sbjct 614922 ATCCAGAAGGAGTCCACTCTGCATTTGGTTCTCCGTTTGCGTGGTGG 614876 >seq66 Length=396251 Score = 84.2 bits (92), Expect = 2e-11 Identities = 388/606 (64%), Gaps = 26/606 (4%) Strand=Plus/Plus Query 138157 TCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCCGTT 138216 || || || |||| || || |||| || | | || | |||||||||||| || ||| Sbjct 305855 TCAACCGTGAACTGAATAGCGGCAGCTGCGGCCTGAGTGCGCAGATAATACATACCAGTT 305914 Query 138217 TTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAGTCGGTTT 138275 || || || || ||| |||| | || || |||||| | || | || | || Sbjct 305915 TTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTACCCATAGTTGGGGCC 305974 Query 138276 CGCCAG-AAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCA 138334 || | |||||| | |||| | ||||||| || ||||||| || ||| | |||| Sbjct 305975 TGCATGTAAATAT-TCAAACTCT-GACTCTGGTCAATGAAAGGACCACGAGCGGCAGCCA 306032 Query 138335 TGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATGTC 138394 | | ||| | | || | || ||||| ||||||||||||||||| ||||| Sbjct 306033 TATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAATATCCT 306092 Query 138395 GCGGTATTGTTGCAATATTTTGAATG----CTCCCGTTGGCCGCAATGATGCGATTTCTC 138450 | || || | || || | || ||| | || ||| |||| | | ||| || Sbjct 306093 GAGGAATCGAGGCGATGTCTTTAATAGAACCACCACTTG----CAATCAATCTATTCTTC 306148 Query 138451 ATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACC 138510 || |||||||| | ||| || | | | ||| || | ||||| || | || Sbjct 306149 ATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACGATT 306208 Query 138511 TGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGAT 138570 || |||||||| ||||| |||| | | ||| | ||| |||||||||||| || || Sbjct 306209 TGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAACAT 306268 Query 138571 TCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAA 138630 || |||| || | || |||| || | || || ||||| || || | ||| ||| Sbjct 306269 TCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGGGAA 306328 Query 138631 TTCCGTAAACCGTGAAGCTTGA-TTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCT 138689 || || ||||| | ||||| ||| | || | | |||||||||||| || | Sbjct 306329 TTACGCAAACCATACTTCTTGAGATCG-GCTTTCAAAGTATCCCAGTCCCACAAGTCAGT 306387 Query 138690 AGGTTTTTTGTTCCACATATCGTA------CTGTAACATTCCCAAACTTGCGGGACTGCC 138743 |||| | | ||| | |||||| ||| || |||| || || |||||||| Sbjct 306388 AGGTGTAACGCCCCAAAGATCGTAGGAAAGCTG--ACCTTCCGAA----GCAGGACTGCC 306441 Query 138744 TTCGTA 138749 |||||| Sbjct 306442 TTCGTA 306447 >seq22 Length=83673 Score = 82.4 bits (90), Expect = 7e-11 Identities = 115/160 (72%), Gaps = 6/160 (4%) Strand=Plus/Plus Query 126031 GTCGCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAtttttttt 126090 ||||| ||||| || || || || || ||||| || ||||| |||||||| | Sbjct 16683 GTCGCATTCGCAGCTGTTGAGGGTGTTTTCTTCTCAGGATCCTTTGCTGCTATTTTCTGG 16742 Query 126091 ATAAAGACAAAGGGTA---TAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGT 126147 | || |||| || | ||||| ||| | || ||||| |||||||||||||||||| Sbjct 16743 CTCAA---AAAGCGTGGCCTTATGCCGGGTTTGACCTTCAGTAACGAGTTGATTTCTCGT 16799 Query 126148 GACGAAGGACTCCATACGGACTTTGCATGTCTGTATTACA 126187 ||||| || || ||||| || || || ||||| ||||| Sbjct 16800 GACGAGGGTCTTCATACCGATTTCGCTTGTCTCCTTTACA 16839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897155726120