Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq23 111 1e-19
seq34 107 1e-18
seq3 93.3 3e-14
>seq23
Length=679897
Score = 111 bits (122), Expect = 1e-19
Identities = 166/233 (71%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | |||||| || |||||||| || ||||| || || || |||||||| || | |
Sbjct 614876 CCACCACGCAAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAA 614935
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||| || || || || |||||||| | || | | ||||| || || |||
Sbjct 614936 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 614995
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || ||||| | || || | || |||| ||| | || ||| | || ||
Sbjct 614996 ATACCTTCCTTGTCGC-TGATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCAC 615054
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAA 29791
||||||||| ||||| || || || ||||| || | ||| |||||||| ||||
Sbjct 615055 TTCAAGAGTGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTTAA 615107
>seq34
Length=648589
Score = 107 bits (118), Expect = 1e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||| |||| ||||| || || || ||||| || || | || ||||||
Sbjct 446328 ACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCC 446387
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| ||||| ||||| ||||| | ||||| | ||||| || || |||||||| || ||
Sbjct 446388 ATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTT 446447
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| | || |||||||| || | |||||| | || || || || || ||
Sbjct 446448 GTCGCTGATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAAT 446507
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
||| || || || || || || | || |||||||||||
Sbjct 446508 AGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCATTTT 446546
>seq3
Length=255871
Score = 93.3 bits (102), Expect = 3e-14
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || ||||| ||||| ||||| ||||| || ||||| || || | | ||||||
Sbjct 112800 ACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCC 112741
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || ||||||||||| | || | | ||| || || || |||||||| || ||
Sbjct 112740 ATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTT 112681
Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|| ||||||| | || || | || | |||||| ||| || || || || |
Sbjct 112680 ATC-ACTAATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGA 112622
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|||| || || |||| || || | || |||||||||||
Sbjct 112621 TAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCATTTT 112582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218829106139
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |