Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq3 138 2e-27
seq34 111 3e-19
>seq3
Length=255871
Score = 138 bits (152), Expect = 2e-27
Identities = 163/218 (75%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| ||||| ||||| ||||| || |||||||| || || || ||||| || | | ||
Sbjct 112800 ACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCC 112741
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| || ||||| ||||| ||||| || | |||||| || ||||| || ||||||||
Sbjct 112740 ATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTT 112681
Query 82715 ATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773
||| ||| |||||| ||||| ||||| || ||||| | ||| || || | || |
Sbjct 112680 ATCACTAAT-TTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGA 112622
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
| ||||| ||||| | ||||| | || |||||||||
Sbjct 112621 TAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCATT 112584
>seq34
Length=648589
Score = 111 bits (122), Expect = 3e-19
Identities = 157/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||| | ||| || || ||||| || || || ||||| || | | ||
Sbjct 446328 ACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCC 446387
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || ||||| ||||| ||||| | | || || || ||||| || ||||||||
Sbjct 446388 ATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTT 446447
Query 82715 ATCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773
|| ||||| |||||| ||| || || || ||||||| || || || | || |
Sbjct 446448 GTCGCTGATCTT-GCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAA 446506
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
| ||||| || ||||||||||||| || |||||||||
Sbjct 446507 TAGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCATT 446544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826206206781
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |