Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq34 109 5e-19
seq23 107 2e-18
seq3 93.3 4e-14
>seq34
Length=648589
Score = 109 bits (120), Expect = 5e-19
Identities = 150/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || || |||||||| ||||| || ||||| || | ||| | | | ||||||||
Sbjct 446338 AAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCA-TCCTCGAG 446396
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||| || || ||| | || | ||||||||||| ||||| || |||||||||||| ||||
Sbjct 446397 CTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGAT 446456
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| |||| ||| | ||||| | | ||| || |||| ||| | || || ||
Sbjct 446457 CTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTTCC 446516
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || |||| ||||||||||||
Sbjct 446517 CGTCAACGTCTTTATGAAAATCTGCAT 446543
>seq23
Length=679897
Score = 107 bits (118), Expect = 2e-18
Identities = 150/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | |||||||| ||||| || || || ||| | ||| |||||| |||
Sbjct 614897 AAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTCCTCAAGC 614956
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| ||| | || || ||||||||||| ||||| || |||||||||||| |||||
Sbjct 614957 TGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGATC 615016
Query 133575 TTTTGCTTGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
|| ||| | | || || | || || | | |||||| || | |||| || || ||
Sbjct 615017 TTGCTCTTCA-CAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGTCTTTCC 615075
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661
||||| || || | || |||||||||
Sbjct 615076 GGTCAAGGTCTTGATAAAGATCTGCATG 615103
>seq3
Length=255871
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||||||||| || ||||| || | ||| | | | || || ||||| |||||
Sbjct 112781 GTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCTTCAAGCTGTTTGCC 112723
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || || || ||||| ||||| || |||||||| || | || || |||
Sbjct 112722 AGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACTAATTTTGCTCTT 112663
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| ||||| ||||| ||| || || |||| ||||| || || || || |||||
Sbjct 112662 TACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCTTTCCTGTTAGAGT 112603
Query 133643 TTTTACGAAAATCTGCAT 133660
|| | ||||||||||||
Sbjct 112602 CTTGATGAAAATCTGCAT 112585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420322621960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |