Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq34 109 5e-19 seq23 107 2e-18 seq3 93.3 4e-14 >seq34 Length=648589 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || || |||||||| ||||| || ||||| || | ||| | | | |||||||| Sbjct 446338 AAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCA-TCCTCGAG 446396 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || ||| | || | ||||||||||| ||||| || |||||||||||| |||| Sbjct 446397 CTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGAT 446456 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| |||| ||| | ||||| | | ||| || |||| ||| | || || || Sbjct 446457 CTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTTCC 446516 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || |||| |||||||||||| Sbjct 446517 CGTCAACGTCTTTATGAAAATCTGCAT 446543 >seq23 Length=679897 Score = 107 bits (118), Expect = 2e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | |||||||| ||||| || || || ||| | ||| |||||| ||| Sbjct 614897 AAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTCCTCAAGC 614956 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || || ||||||||||| ||||| || |||||||||||| ||||| Sbjct 614957 TGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGATC 615016 Query 133575 TTTTGCTTGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | || || | || || | | |||||| || | |||| || || || Sbjct 615017 TTGCTCTTCA-CAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGTCTTTCC 615075 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||||| || || | || ||||||||| Sbjct 615076 GGTCAAGGTCTTGATAAAGATCTGCATG 615103 >seq3 Length=255871 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| || ||||| || | ||| | | | || || ||||| ||||| Sbjct 112781 GTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCTTCAAGCTGTTTGCC 112723 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || || || ||||| ||||| || |||||||| || | || || ||| Sbjct 112722 AGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACTAATTTTGCTCTT 112663 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | ||||| ||||| ||| || || |||| ||||| || || || || ||||| Sbjct 112662 TACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCTTTCCTGTTAGAGT 112603 Query 133643 TTTTACGAAAATCTGCAT 133660 || | |||||||||||| Sbjct 112602 CTTGATGAAAATCTGCAT 112585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420322621960