Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq66 163 7e-35 >seq66 Length=396251 Score = 163 bits (180), Expect = 7e-35 Identities = 432/654 (66%), Gaps = 7/654 (1%) Strand=Plus/Minus Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570 ||| || ||| || || ||| | | || || || || ||||| || || ||||||||| Sbjct 307482 CAAATGAGTTCGTGTTTCCTTGTTTGCATGAAAGACGACTCTATCGATGGCATTTATGAT 307423 Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630 | || ||| |||||||||||||||| |||| || |||||| || | ||||| Sbjct 307422 ACCCTAAAATCTTGTGCTCTTATTTCTAAATCTGCTGGTGGTATTGGTCTTAATGTTCAC 307363 Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690 |||| || | | || | | ||||| | || ||| | || | || || || Sbjct 307362 AATATCCGTGCCACTGGTTCTTACATCGCCGGTACTAACGGTACATCCAACGGTATTCTT 307303 Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT 110750 |||||| | | |||||||| ||||||| ||||| |||| ||||| || | | | Sbjct 307302 CCAATGCTTCGTGTCTTCAATAACACTGCTCGTTATGTTGATCAGGGTGGCAACAAACGT 307243 Query 110751 ---GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807 || | || ||||| ||||| ||||| |||||| ||| | ||||| ||| | || Sbjct 307242 CCAGGTGCTTTCGCTATTTATCTTGAACCCTGGCATGATGATGTTTTTGACTTCATCGAT 307183 Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867 |||||||| || || |||||| | || |||||| | |||| || | ||| Sbjct 307182 CTTCGTAAGAACACTGGTAAGGAAGAAGTCCGTGCCCGTGATCTGTTTTTGGCTCTTTGG 307123 Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCT 110927 ||| | || ||||||||||| | ||| | |||| |||| | | |||||||| Sbjct 307122 ATTCCTGACTTATTCATGAAGAGAGTTAAGTCTGATGGAGAGTGGACATTGATGTGTCC- 307064 Query 110928 CATCG-TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAA 110986 || || | |||||||| ||||||| ||||| | || || ||||| |||||| | Sbjct 307063 CAACGAATGCCCTGGTCTTGCTGATGTTTATGGTGATGAATTCGAAGAGCTTTACACACG 307004 Query 110987 ATATGAAAAAGAAGGCAAGTTTCG-CAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAA 111045 |||||| || || ||| | || || |||||| | ||||||| | | Sbjct 307003 TTATGAACGTATGGGTAAAGGTCGTCGTAC-CATCAAAGCTCAGAAGCTTTGGTACGCCA 306945 Query 111046 TCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATC 111105 | | ||| | ||| ||| || || | ||||| || | ||||| ||||| ||| | Sbjct 306944 TTTTGGAAGCTCAAACTGAGACAGGTAATCCTTTCATGCTTTATAAGGATCAGGCTAACC 306885 Query 111106 GCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159 |||| |||||| ||| | || || || ||| | |||||||||||||| Sbjct 306884 GCAAGAGTAATCAGCGTAATCTTGGTACTATCAAGAGTTCTAATTTGTGCTGTG 306831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186811598722919