Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq3 96.9 8e-15
seq23 86.0 1e-11
>seq3
Length=255871
Score = 96.9 bits (106), Expect = 8e-15
Identities = 158/227 (70%), Gaps = 3/227 (1%)
Strand=Plus/Plus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| || ||| || || |||||||| || ||||| | || || |||
Sbjct 112582 AAAATG---CAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAA 112638
Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283
|||||| | || | |||||| || ||| || || ||||| ||| ||
Sbjct 112639 TCCAATGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCT 112698
Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343
||| ||| | ||||||||||| || || ||| | |||||||| | || | | ||
Sbjct 112699 GACCAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGAC 112758
Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||| ||||||||||||| ||||||||| | ||| | | |||||
Sbjct 112759 TACAACATCCAGAAAGAGTCCACTCTTCACTTGGTTCTCCGTCTTCG 112805
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||| | | ||| | ||||||||| ||||||||||||| || ||||||| | ||
Sbjct 112805 CGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTG 112746
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| |||||||| ||||| || || ||||||||||| ||||||||
Sbjct 112745 CGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTG 112702
>seq23
Length=679897
Score = 86.0 bits (94), Expect = 1e-11
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || | || ||||| || |||||| | |||||||| | |||
Sbjct 615099 CAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAGTCTAATGAT 615040
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| ||||| | || ||| ||||| || || ||||| ||| || ||| ||
Sbjct 615039 ACCATCGAAGCTGTGAAGAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGACCAGCAG 614980
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| ||||||||||| || |||||| | || || || | ||| | |||| || ||| ||
Sbjct 614979 CGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTATAACATC 614920
Query 206353 CAGAAAGAGTCTACTCTTCA 206372
||||| ||||| ||||| ||
Sbjct 614919 CAGAAGGAGTCCACTCTGCA 614900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181819603775759
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |