Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq3 93.3 4e-14
seq34 89.7 5e-13
>seq3
Length=255871
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
|||||| || | | |||||||| || ||||||||||| | ||| || ||||||
Sbjct 112794 AACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTC 112735
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033
|||||||| || | |||| ||||| ||||| || ||||| || ||||| ||||| |
Sbjct 112734 AAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACT 112675
Query 132034 AATTTT-TTGTTTCAACTG-TTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091
|||||| | ||| || | || | || || | | || || |||| || | ||
Sbjct 112674 AATTTTGCTCTTT--ACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTC 112617
Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || ||||| || ||||||||||||||
Sbjct 112616 TTTCCTGTTAGAGTCTTGATGAAAATCTGCAT 112585
>seq34
Length=648589
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || || | ||||| || || ||||||||||| | ||| || ||| |||
Sbjct 446335 ACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCG 446394
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
||||||||||| | |||| | |||||| || || ||||| || ||||| || ||| |
Sbjct 446395 AGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTG 446454
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || ||| | || | || || | | ||| || |||| || | || ||
Sbjct 446455 ATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTT 446514
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| |||| || |||||||||||||||||
Sbjct 446515 CCCGTCAACGTCTTTATGAAAATCTGCAT 446543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610729346440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |