Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq66 372 4e-98 seq22 206 4e-48 >seq66 Length=396251 Score = 372 bits (412), Expect = 4e-98 Identities = 1355/2099 (65%), Gaps = 45/2099 (2%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || |||||||| | | | ||||| | || || ||||| |||||||| ||||||| | Sbjct 305861 GTGAACTGAATAGCGGCAGCTGCGGCCTGAGTGCGCAGATAATACATACCAGTTTTCAAA 305920 Query 68434 CC--TAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGA-ATAACTTGGATCGGCT 68490 || ||||| || ||||||||||||||||| || || || ||| | || | || Sbjct 305921 CCCTTAGAC--CAACCGTAGAAATGCATACTAGTGAGCTTACCCATAGTTGGGGCCTGC- 305977 Query 68491 ATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTT 68550 || | |||||||| ||||| || || ||||||| || | | | || ||||| | Sbjct 305978 ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGCAGCCATATCA 306037 Query 68551 ATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGA 68610 ||||| |||| ||| |||||||| | ||||| | | | || ||||| | ||| Sbjct 306038 ATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAATATCCTGAGGA 306097 Query 68611 A--GGCTCG-TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCA 68667 | | || | | || ||| || |||||| | || | | ||||||| || ||||| Sbjct 306098 ATCGAGGCGATGTCTTTAATAGAACCACCACTTGCAATCAATCTATTCTTCATATCATCG 306157 Query 68668 TTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCC 68727 ||||| | | || | | | || |||| |||||||| ||||| ||||| Sbjct 306158 TTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACGATTTGGAATTCA 306217 Query 68728 CCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTT 68787 |||| || ||||| | || ||| | || ||| | || || | | ||||||| | Sbjct 306218 CCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAACATTCATTGTAG 306277 Query 68788 CCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGA 68847 || | ||||||| ||| || ||||| ||||||||||| || | | ||| | | | Sbjct 306278 CCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGGGAATTACGCAAA 306337 Query 68848 CCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACA 68907 |||| | ||| | |||| | | | ||| ||||| | |||| ||| ||| Sbjct 306338 CCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCAGTAGGTGTAACG 306397 Query 68908 TTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAA 68967 |||||||||||| || || | ||| || | || || |||||| Sbjct 306398 CCCCAAAGATCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGCCTTCGTAAGTCTCATAA 306457 Query 68968 GGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCG 69027 || || || | ||| | || | || || | || | | ||| || || || Sbjct 306458 GGACCATCAACCTTAGCAATCTCGATAGAAGCTTCAACAGCTGCATGATATATGGTCTCA 306517 Query 69028 AAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAA-AGAAT 69086 || |||| |||| || ||||| || ||| | || || || | | | | | || Sbjct 306518 AATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAAAAGGC-AGTCTGAGCATAAA 306576 Query 69087 AAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACT 69146 || ||||||||||| || | ||| || | | | || |||||||| | | | || |||| Sbjct 306577 GAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGTCTATGACGCATGTTGGAACG 306636 Query 69147 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT-AAGATTTCGG---- 69201 ||| ||||| | ||| || ||||| |||| ||||||| ||| ||| | | | Sbjct 306637 ACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATTTGATTCAAGTTATAAGTGAT 306696 Query 69202 --ACT--ACTACTTTAACCACGTCCTTTAGTTT---GAGAAAATCAA-ATCGTCCATCTA 69253 | | || || | | || | ||| | | ||||| | || ||| | ||| Sbjct 306697 AGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAGAACACCATCATCCTTTGTCTT 306756 Query 69254 TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTG 69313 || |||| | || || || || || |||||||| || || || | || | | | Sbjct 306757 TA-CAAAGGCAGGGAGAGCAACTGAAGCCAGATTACATACAGCAGTTTCCTCAGGACTAG 306815 Query 69314 CATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGAT 69373 || | | || || || | |||| || |||||||| || ||||| |||||| Sbjct 306816 AGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGATAGTACCAAGATTACGCTGAT 306875 Query 69374 TACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAG 69433 ||||||| |||| ||||| ||||| || || ||| |||| || ||| | |||| Sbjct 306876 TACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAAGGATTACCTGTCTCAGTTTGAG 306935 Query 69434 ATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT--TACG--GTCTTGTAACGCTTC 69489 ||| | ||| | | ||||| | ||| || || |||| | | | || | | | Sbjct 306936 CTTCCAAAATGGCGTACCAAAGCTTCTGAGCTTTGATGGTACGACGACCTTTACCCATAC 306995 Query 69490 TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCA 69549 |||||| |||| || ||| |||||||||||| || |||||||| | | ||| Sbjct 306996 G----TTCATAACGTGTGTAAAGCTCTTCGAATTCATCACCATAAACATCAGCAAGACCA 307051 Query 69550 GGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAAT 69609 || ||||| || ||||||||||||| |||| | ||||| |||||||| ||||| ||| Sbjct 307052 GGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCAGACTTAACTCTCTTCATGAAT 307111 Query 69610 AGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTA 69669 | || |||||||||||||| | ||| ||||| | || | |||||| || || || Sbjct 307112 AAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCACGGACTTCTTCCTTACCAGTG 307171 Query 69670 ttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCC 69729 || || |||||||| || || | || |||| |||||| ||||| ||||| || || Sbjct 307172 TTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGCCAGGGTTCAAGATAAATAGCG 307231 Query 69730 ATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACT 69789 | | || || ||||| || || |||||||| | || | ||||||||||| |||| Sbjct 307232 AAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAACGAGCAGTGTTATTGAAGACA 307291 Query 69790 CTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTT 69849 | ||||| |||| |||||| || ||| |||| || || || | || ||| || | Sbjct 307292 CGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTACCGGCGATGTAAGAACCAGTG 307351 Query 69850 GCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAA 69909 || || ||||| || | ||||| || || || || |||||| || ||||||||| Sbjct 307352 GCACGGATATTGTGAACATTAAGACCAATACCACCAGCAGATTTAGAAATAAGAGCACAA 307411 Query 69910 CGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAG 69969 ||| | || ||||| || || || || || ||| ||||| || ||| ||||| Sbjct 307412 GATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCTTTCATGCAAACAAGGAAACAC 307471 Query 69970 CTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAAC 70029 | ||||||| | ||| || ||||| | || || ||||| ||||| ||||| Sbjct 307472 GAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAAGTGGGAGAAGCGTGGGTGAAG 307531 Query 70030 CATTTTTCAGAAAGCAGATTGTATGTTTCAAT-AGCT----GATTCTATATCCCACTGAT 70084 | || | || | || | ||||||||| || | || ||| || | || || Sbjct 307532 TACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTAGGGATGTTAAAACC-----AT 307586 Query 70085 GAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTA 70144 | || || || || || | ||| | ||||||||| || ||||| | ||| | Sbjct 307587 GGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGTTCGTGAACAACACCATTAA 307646 Query 70145 TTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTC 70204 ||||| || ||| || | || ||||| || || || || |||||| || || | Sbjct 307647 GTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCGAAGTAATTGTATTTGAAATCAC 307706 Query 70205 TTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAG 70264 | |||| || ||| || | || | | || || | || | || ||| Sbjct 307707 GCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGCTTCTTGACGACTTCATGAACCT 307766 Query 70265 TAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTT 70324 || || || || || | | | ||| | || ||||||||| || ||| ||| | Sbjct 307767 CTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGGGGTTAACATAGGTGTATAGATCCT 307826 Query 70325 CCATTACATCACT-AAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTG 70383 | | || | ||| ||| || | ||| || | |||||| | || || || || || | Sbjct 307827 CTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTGTGAAGGTTAGAAATAGCAATACGT 307885 Query 70384 GCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGC 70442 || || |||| |||||||||||||||||| || || | |||| || |||| || || Sbjct 307886 GCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTCATACTAGCAGCAGTTTCAGCTGC 307944 >seq22 Length=83673 Score = 206 bits (228), Expect = 4e-48 Identities = 589/897 (66%), Gaps = 14/897 (2%) Strand=Plus/Minus Query 39311 GACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCT 39370 |||||||| || |||||||| || ||| || |||||||| ||||| || || || Sbjct 17134 GACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTTACCA 17075 Query 39371 TCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAAT 39430 ||||||| ||||| ||||||||||| || ||||| | |||| || || || Sbjct 17074 GCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTTCTGA 17015 Query 39431 CCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAA 39490 || || || | || |||||| || ||||| || | || ||||| | || | Sbjct 17014 CCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTCGGCA 16955 Query 39491 TTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACG 39550 ||||| || | || | || || | ||| || | | |||| | || || || || Sbjct 16954 TTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATCGACT 16895 Query 39551 GCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGA---TGCAATAAATGTTTA 39607 || || || | || | ||| ||| || | | ||| | | ||||| | Sbjct 16894 GCTTCAGTAAGAAT--ACGTT-CTATAACAAAAGGTGCTGGTCTGTTCTCCAAATGGCTG 16838 Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 | | | || ||||| || ||| || ||||| || | | ||| || |||||| Sbjct 16837 TAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCGTTACTG 16778 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || | || ||||| || ||||||||||||||||| || || |||||||| ||||| Sbjct 16777 AAGGTCAAACCCGGCATAAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAAGGATCCT 16718 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787 || ||||| | || || || ||||| ||||| || |||| ||| || |||| | || Sbjct 16717 GAGAAGAAAACACCCTCAACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACTAGCTTCC 16658 Query 39788 T--TATGT-ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 | | || ||||| | ||||| | || ||||||| | ||| || || Sbjct 16657 TCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAATCGTGAAA 16598 Query 39845 ATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGA 39904 || |||| ||| || | || ||| | | | || || || || || || || | |||| Sbjct 16597 ATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATAAGCAGA 16538 Query 39905 CTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCT 39964 || |||||||| || || ||||| || ||| ||||| ||||||||||| || | || Sbjct 16537 CTGTACATTTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCACTTGGCC 16478 Query 39965 TCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCA 40024 |||| || || || | || || || |||| || |||||||| || || ||| Sbjct 16477 TCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATACCGTCA 16418 Query 40025 CTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTA 40084 |||||||||||||| || | || || |||||| || ||||||| ||| || Sbjct 16417 CTAGCGGCAAAAAACGCTAGAACTCGTGAAATAAAGTAACGTTCATCGTCATTCAGCCTA 16358 Query 40085 ---TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCC 40141 | |||||| | ||||| | | | ||| || ||||||| |||||| || || || Sbjct 16357 AGTTCCCAGTCCTGAATATCCTGGGCCAGATCAACCTCTTCAGTTGTCCAGAAAGAAGCT 16298 Query 40142 TCTGCCTTTTTGTACATGTTCCATATA-TCACGATATTGTATTGGAAAAATAACAAA 40197 || |||| || || | ||| ||| || || || | || ||||| | |||||| Sbjct 16297 TCAGCCTGCTTATAAGCCTGCCAGATACTCTCG-TACTCGATAGGAAAGAGAACAAA 16242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908121677560