Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq66 147 3e-30 seq17 87.8 2e-12 >seq66 Length=396251 Score = 147 bits (162), Expect = 3e-30 Identities = 1122/1783 (63%), Gaps = 51/1783 (3%) Strand=Plus/Plus Query 110331 TGAACTGAATTGGTCGG--GCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAG 110388 |||||||||| | ||| ||| |||| | || ||||| ||||| || || || | Sbjct 305862 TGAACTGAATAG--CGGCAGCTGCGGCCTGAGTGCGCAGATAATACATACCAGTTTTCAA 305919 Query 110389 TCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCAT 110448 || | ||| |||| | ||||||| || |||||| ||| ||||| | ||| Sbjct 305920 ACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTACCCATAGTTGGGGCCTGCAT 305979 Query 110449 GAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAAT 110508 | | | |||| ||| ||||| ||||||||||| | || || || ||||||||||| Sbjct 305980 GTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGCAGCCATATCAAT 306039 Query 110509 GACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGAT 110568 | |||| | |||||||| || || || |||| ||| ||||| | || || Sbjct 306040 AATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAATATCCTGAGGAAT 306099 Query 110569 ATCTGAGATATTCTGGATGGAACCCCCCGCCTTCAC-CATGAGATCCTTCATATCCTTGG 110627 | ||| | | || ||||| || | | || || || ||||||||| | | Sbjct 306100 CGAGGCGATGTCTTTAATAGAACCACCA-CTTGCAATCAATCTATTCTTCATATCATCGT 306158 Query 110628 ACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCAC 110687 ||||||||| || | ||||| |||| || | || || || || |||| Sbjct 306159 TCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACGATTTGGAATTCAC 306218 Query 110688 CTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTAC 110747 | || | | |||||| ||||| ||||| ||| | || || || |||||||| | | Sbjct 306219 CAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAACATTCATTGTAGC 306278 Query 110748 CCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGAC 110807 | |||||||| | || || || || ||||| ||||| | | ||| ||||| | || Sbjct 306279 CTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGGGAATTACGCAAAC 306338 Query 110808 CCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTG--AGCTTGGTTTCACC 110865 | | || ||||| | || | | ||||||||| | | || | ||| | || Sbjct 306339 CATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCAG-TAGGTGTAACG 306397 Query 110866 TTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATA 110925 |||| | || | |||| |||| || || ||| || || | || ||||| Sbjct 306398 C-CCCAAAGATCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGCCTTCGTAAGTCTCATA 306456 Query 110926 GGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTT 110984 | ||| | | | ||| | || | || || || | | ||| ||||| ||||| | Sbjct 306457 AGGACCATCAACCTTAGCAATCTCGATAGAA-GCTTCAACAGCTGCATGATATATGGTCT 306515 Query 110985 CAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG-CGGCACAAA 111043 |||| || || ||| | ||| | ||| || | || ||||| | | || | | || | Sbjct 306516 CAAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAAAAG-GCAGTCTGAGCATA 306574 Query 111044 ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGAC 111103 | || |||| || | || | |||||||||| |||| ||||| || ||||| || || Sbjct 306575 AAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGTCTATGACGCATGTTGGAA 306634 Query 111104 TTTCGCGCAGTCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGT 111162 || || ||| || || || |||| | || || | | | || | || | || Sbjct 306635 CGACGAGCC-TCTGGGACAGGGTAGTAATTCTTATCGATAATTTGATTCAAGTTATAAGT 306693 Query 111163 AACAATCTTTGTGATTTCATG-AAGTTTTTCATAATCAAA-AGTGCG-----AGTCTCTT 111215 | | || | ||||| || | || | ||||| | || | | || | Sbjct 306694 GATAGATTTGACAACCTCATGCAAATGCTTGA-AATCATAGAGAACACCATCATCCTTTG 306752 Query 111216 CATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTAT 111275 || ||| | || || || | ||| |||| ||| || ||||| || || || | Sbjct 306753 TCTTTACAAAGGCAGGGAGAGCAACTGAAGCCAGATTACATACAGCAGTTTCCTCAGGAC 306812 Query 111276 CTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTT 111335 | |||||| | ||||| || || || |||||||| || || || | ||| | Sbjct 306813 TAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGATAGTACCAAGATTACGCT 306872 Query 111336 GGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCT 111395 | |||||||| ||| | |||||| || |||||| | || | || ||||| || | Sbjct 306873 GATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAAGGATTACCTGTCTCAGTTT 306932 Query 111396 GTGATTTGAGAATAGCCTTCCAAA-CATCGGCG----GCTGGTACAATGGCGTTGGCCCG 111450 | | || | ||| || | ||||| | || | | | |||||| | | | || ||| Sbjct 306933 GAGCTTCCAAAATGGCGTACCAAAGCTTCTGAGCTTTGATGGTACGACGACCTTTACCCA 306992 Query 111451 TCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAG 111510 | | | || || |||||| || |||| || || ||||| | || | || Sbjct 306993 TACGT-----TCATAACGTGTGTAAAGCTCTTCGAATTCATCACCATAAACATCAGCAAG 307047 Query 111511 ACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCA 111569 ||| || || || || ||||| | | | ||| | ||| | || ||| | ||||| Sbjct 307048 ACCAGG-GCATTCGTTGGGACACATCAATGTCCACTCTCCATCAGACTTAACTCTCTTCA 307106 Query 111570 TGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCA 111628 |||| | ||| |||||||| || | |||| ||||| | ||| || | ||||| | | Sbjct 307107 TGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCACGGA-CTTCTTCCTTA 307165 Query 111629 CCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAG 111688 || ||| || | || | ||| || | | ||| | ||||| || |||||||| Sbjct 307166 CCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGCCAGGGTTCAAGATAA 307225 Query 111689 ACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTT 111744 | |||| || || | || | ||| | | |||| ||||| || || ||| || Sbjct 307226 ATAGCGAAAGCACCTGGACGTTTGTTGCC-ACCCTGATCAACATAACGAGCAGTGTTATT 307284 Query 111745 AAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGA 111804 || || ||||||||||||| |||||| | ||| ||| || || || || ||| Sbjct 307285 GAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTACCGGCGATGTAAGA 307344 Query 111805 TTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTG 111864 | |||| | | || || | | | |||||||| ||||| | || || || | Sbjct 307345 ACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCAGATTTAGAAATAAG 307404 Query 111865 CGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAG 111924 ||||| | || || |||| || || | ||| ||||| || || || | ||| Sbjct 307405 AGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCTTTCATGCAAACAAG 307464 Query 111925 GAAGC---AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGC 111981 ||| | |||| ||| || ||||| || ||||| |||||| | | || || | || Sbjct 307465 GAAACACGAACT---CATTTGAGGTCTGGGAGTACCGGCATTGTACAAAGTGGGAGAAGC 307521 Query 111982 GTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTT 112040 ||| |||| ||| | | ||||||| ||||||||| || | ||| | |||| Sbjct 307522 GTGGGTGAA-GTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTAGGGATGTTAA 307580 Query 112041 CCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 || ||||| || || || || | ||||| ||| | |||||| Sbjct 307581 AACCATGGATACCAATAGCAACTCTCATGATCATATGCTGTGG 307623 >seq17 Length=111788 Score = 87.8 bits (96), Expect = 2e-12 Identities = 200/296 (68%), Gaps = 4/296 (1%) Strand=Plus/Plus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 ||||| |||||||| || || ||||| | || | || | |||| || |||| ||| Sbjct 103273 GCATCGATCTCATCTATAAACACAATCGACGGAGCCTCTTTTCTGGCGGTTGCAAAAAGA 103332 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCA-GAGCA 11748 ||||||||||| |||||| ||||| |||||||| || ||||| | | || | | Sbjct 103333 TCGCGAACCCTAGAGGCACCGACACCTACAAACATTTCTACAAACTCCGAACCACTAACG 103392 Query 11749 CTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808 || || || || || || |||||| || | ||| || || | ||||| || || Sbjct 103393 CT-GAAAAAAGGCACGCCTGCTTCACCAGCTGTAGCTTTTGCAAGCATAGTCTTACCTGT 103451 Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCA-CCACTTCCAAAATATC 11867 || ||| |||| | | || ||||| ||||| || ||| ||| || | ||| Sbjct 103452 TCCAGGCGGGCCCGATAAGATAGCACCTCGTGGGATTTTTGCACCCAGTTTC-TCATACT 103510 Query 11868 TCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCA 11923 | | |||| ||| | ||| || |||| ||| || |||| |||||||| | ||| Sbjct 103511 TTTGGGGTACCTTCAAAAACTCTACAAACTCCATAATTTCAGCTTTGGCCTCATCA 103566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031379818400