Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq66 143 3e-29 seq22 104 3e-17 >seq66 Length=396251 Score = 143 bits (158), Expect = 3e-29 Identities = 400/608 (66%), Gaps = 12/608 (2%) Strand=Plus/Minus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||| |||| || | || |||||||| || |||| ||| ||| ||||||| Sbjct 307610 TCATGAGAGTTGCTATTGGTATCCATGGTTTTAACATCCCTAAGGTCATCGAAACATACG 307551 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 || ||||| | | |||| |||||| ||||| | || || | | ||| |||||||| Sbjct 307550 ACTTGATGTCCAACAAGTACTTCACCCACGCTTCTCCCACTTTGTACAATGCCGGTACTC 307491 Query 19236 ACAACCCGCAGATG---TCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGG 19292 || || || ||| ||| |||||||| || ||||| || ||| || || | Sbjct 307490 CCAGACCTCAAATGAGTTCG---TGTTTCCTTGTTTGCATGAAAGACGACTCTATCGATG 307434 Query 19293 GCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGA 19352 |||| || || || || || || || | || || || | | || ||||| || Sbjct 307433 GCATTTATGATACCCTAAAATCTTGTGCTCTTATTTCTAAATCTGCTGGTGGTATTGGTC 307374 Query 19353 TCCACTGCTCG-AATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCC 19411 | | || || |||||||| | | |||| | ||| || || ||||| | || Sbjct 307373 TTAA-TGTTCACAATATCCGTGCCACTGGTTCTTACATCGCCGGTACTAACGGTACATCC 307315 Query 19412 GACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGG 19471 ||||||| | |||||||| || |||||||| ||||| || | || || | ||||| Sbjct 307314 AACGGTATTCTTCCAATGCTTCGTGTCTTCAATAACACTGCTCGTTATGTTGATCAGGGT 307255 Query 19472 GGCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCA 19529 ||| |||||| || | ||| ||||| || || || || || ||||| | || || Sbjct 307254 GGCAACAAACGTCCAGGTGCT--TTCGCTATTTATCTTGAACCCTGGCATGATGATGTTT 307197 Query 19530 TGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCT 19589 | || ||| |||| || || |||| ||| | || || | || || || || | Sbjct 307196 TTGACTTCATCGATCTTCGTAAGAACACTGGTAAGGAAGAAGTCCGTGCCCGTGATCTGT 307137 Query 19590 TCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGC 19649 | ||| | |||||||| ||| |||||||| ||| ||| || || | ||| ||| Sbjct 307136 TTTTGGCTCTTTGGATTCCTGACTTATTCATGAAGAGAGTTAAGTCTGATGGAGAGTGGA 307077 Query 19650 ACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATG 19709 ||||||| || ||||||||||||| || | || || || || || | ||| | | Sbjct 307076 CATTGATGTGTCCCAACGAATGCCCTGGTCTTGCTGATGTTTATGGTGATGAATTCGAAG 307017 Query 19710 AGTTGTAC 19717 || | ||| Sbjct 307016 AGCTTTAC 307009 >seq22 Length=83673 Score = 104 bits (114), Expect = 3e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 60015 TTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGC 60074 |||||||| || || || |||||||||||||||||||||||||||||| |||||||| Sbjct 16710 TTCTTCTCAGGATCCTTTGCTGCTATTTTCTGGCTCAAAAAGCGTGGCCTTATGCCGGGT 16769 Query 60075 CTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119 ||| ||| |||||| ||||||| || |||||||| || ||| Sbjct 16770 TTGACCTTCAGTAACGAGTTGATTTCTCGTGACGAGGGTCTTCAT 16814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524258331760