Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq23 113 3e-20
seq34 105 4e-18
seq3 93.3 3e-14
>seq23
Length=679897
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||||||| |||||| |||||| || |||||||| || ||||| || || |||| |||
Sbjct 614894 ACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTCCTCA 614953
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| || || || || || || | |||||| ||||| || || | || |||||||| ||
Sbjct 614954 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTG 615013
Query 34618 ATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677
||||| || | | | || || || | ||||||||| | || || || ||
Sbjct 615014 ATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGTCTTT 615073
Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
||||| || || || | ||| |||||||||||
Sbjct 615074 CCGGTCAAGGTCTTGATAAAGATCTGCATGTT 615105
>seq34
Length=648589
Score = 105 bits (116), Expect = 4e-18
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||| || | |||| |||||| || ||||| || || ||||| || ||
Sbjct 446326 AGACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGG 446385
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || |||||||| || || || |||||||| ||||| || || | || |||
Sbjct 446386 CCATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCC 446445
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668
||||| ||||||| ||| | | || ||||| | ||| || || | |||
Sbjct 446446 TTGTCGCTGATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTA 446505
Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
|| || || || || ||||| || | ||||||||||| ||
Sbjct 446506 ATAGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCATTTT 446546
>seq3
Length=255871
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | |||||| | ||||| || |||||| ||| || || ||||| || || ||
Sbjct 112811 CCGCCACGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAG 112752
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | |||||||| ||||| || || || || | ||| |||||||| || ||
Sbjct 112751 AGGGTGCGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGA 112692
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659
| || ||||| || | || || |||| | ||| ||||| | | || ||
Sbjct 112691 ATACCTTCCTTATCACTAATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACC 112632
Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
|| | ||| || || || || |||| || || | ||||||||||| |||
Sbjct 112631 TCGAGGGTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCATTTTG 112581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729296974407
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |