Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq3 123 2e-23
seq34 95.1 8e-15
>seq3
Length=255871
Score = 123 bits (136), Expect = 2e-23
Identities = 184/259 (71%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||| | || || || || ||||| || ||||| ||||| ||||| |||
Sbjct 112582 AAAATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCC 112641
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| |||| |||| |||||| ||| || |||||| | || || ||
Sbjct 112642 AATGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGAC 112701
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
||||| ||| | || || || |||||||| || ||||| | ||||| | || |||
Sbjct 112702 CAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTAC 112761
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGATCAGCAGTT 23847
||||| || ||||||||||| | || || ||| | | | || || |||| || |
Sbjct 112762 AACATCCAGAAAGAGTCCACTCTTCACTTGGTTCTCCGTCTTCGTGGCGGAT--GC--TA 112817
Query 23848 AAAGATGAATTGTATTAAT 23866
| || || | |||||||||
Sbjct 112818 ACAGGTGTAATGTATTAAT 112836
>seq34
Length=648589
Score = 95.1 bits (104), Expect = 8e-15
Identities = 143/201 (71%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||| | || || | |||||||| || || || ||||| ||||| ||
Sbjct 446546 AAAATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCT 446487
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| | || | | |||| || | || ||||| |||||| | || || ||
Sbjct 446486 AATGACACCATCGAGGCTGTCAAAAGCAAGATCAGC-GACAAGGAAGGTATTCCTCCTGA 446428
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| |||||||| || || || || ||||| || || || | ||||| | || ||
Sbjct 446427 CCAGCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTTTCTGACTA 446368
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || || ||||||||
Sbjct 446367 CAACATCCAGAAGGAGTCCAC 446347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009274560132
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |