Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq3 145 2e-29 seq23 143 6e-29 seq34 127 5e-24 >seq3 Length=255871 Score = 145 bits (160), Expect = 2e-29 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| |||||||| ||||| |||| ||||| || | | || Sbjct 112806 ACGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGT 112747 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| ||||| || |||||||||||||| ||||||||||| || |||||||| Sbjct 112746 GCGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACC 112687 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || || || ||| || || || |||||||| || ||| || || | Sbjct 112686 TTCCTTATCACTAATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACCTCGAG 112627 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| || || | ||| || ||||| | |||||||| Sbjct 112626 GGTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCATTTT 112582 >seq23 Length=679897 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || |||||||| || || |||| || || |||| | ||| | || || || |||||| Sbjct 614900 TGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTCCTCAAGCTGC 614959 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || |||||||||||||| || || ||||| || ||||||||||||||||| |||||| Sbjct 614960 TTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGATCTTG 615019 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 |||||||||||||||||| || | ||||| || | ||||| ||||| || ||| Sbjct 615020 CTCTTCACAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGTCTTTCCGGTC 615079 Query 225691 AAAGTTTTTATGAACACTTGCATTTTA 225717 || || || || || | ||||| ||| Sbjct 615080 AAGGTCTTGATAAAGATCTGCATGTTA 615106 >seq34 Length=648589 Score = 127 bits (140), Expect = 5e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| | |||||| || || |||| ||||| || | | || | ||||| Sbjct 446332 AGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCC 446391 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||||||||| | || || ||||| || ||||||||||||||||| Sbjct 446392 TCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCG 446451 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||| || ||||| ||||||||||| | || || || | || || ||| Sbjct 446452 CTGATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTC 446511 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || |||||||| || |||||||| | |||||||| Sbjct 446512 TTTCCCGTCAACGTCTTTATGAAAATCTGCATTTT 446546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529992934826