Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq22 208 7e-49
>seq22
Length=83673
Score = 208 bits (230), Expect = 7e-49
Identities = 552/833 (66%), Gaps = 15/833 (2%)
Strand=Plus/Minus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|||||||| || || || ||||| ||||||||||| || || || | || ||||||||
Sbjct 17119 TTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTTACCAGCCAATGAAATATTC 17060
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTAGAGCTACAAG 4375
||||| ||||| || ||||| | | ||||| | || ||| || | |||||| ||
Sbjct 17059 TCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTTCTGACCCAA-AGCTACGAG 17001
Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435
|| || ||||| ||||| || | ||||||| |||| | ||| || || || | ||
Sbjct 17000 CAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTCGGCATTCATACCGAGTAG 16941
Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495
|| ||||| | || | | | || |||| || || ||| || ||||| || | ||
Sbjct 16940 ACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATCGACTGCTTCAGTAAGAAT 16881
Query 4496 ATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAA 4555
| || ||| | | |||| | || | || | | | | | ||| || ||
Sbjct 16880 ACGTTCTATAACAAAAGGTGCTGGTCTGTTCTCCAAATGGCTGTAAAGGAGACAAGCGAA 16821
Query 4556 ATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCAT 4615
||| ||| | ||| ||||| | ||||| |||||| || || || || |||||
Sbjct 16820 ATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCGTTACTGAAGGTCAAACCCGGCAT 16761
Query 4616 TAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTC 4675
| || | |||||| ||||| || ||||| ||||| || || || ||||| | || ||
Sbjct 16760 AAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAAGGATCCTGAGAAGAAAACACCCTC 16701
Query 4676 TACGGCGGCAAACGCTACTAATCGGGACCCGAA-CGAGCTGGCTTTGTCTTTAATCCATT 4734
|| || || || || |||| ||| |||| | |||| || ||| |||||||
Sbjct 16700 AACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACTAGCTTCCTC-GTCAGTAATCCAGC 16642
Query 4735 TTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATT 4794
| ||||| || || || |||| || | ||||| ||| | || || | ||| ||
Sbjct 16641 GAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAATCGTGAAAATGGCATCAAA-AAGG 16583
Query 4795 TACTTTT-TTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAA 4853
||| ||| | || | | |||||||| || || || || |||||||||||
Sbjct 16582 AACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATAAGCAGACTGTACATTTCAGAG 16523
Query 4854 TGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACT 4913
|| || || || || |||||| |||||||||||||| | || || | | |||
Sbjct 16522 TGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCACTTGGCCTCAGAGATACCAACG 16463
Query 4914 TCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAAC 4973
|| ||| || || || ||||| || || || ||||||||||| || |||||||||
Sbjct 16462 TCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATACCGTCACTAGCGGCAAAAAAC 16403
Query 4974 GCCAAAACATGAGATATAAAGTACTGT---TCGTCA---GGCTTAAGTTTTTTCCAGTGG 5027
|| | ||| | || |||||||| || |||||| || |||| || |||||
Sbjct 16402 GCTAGAACTCGTGAAATAAAGTAACGTTCATCGTCATTCAGCCTAAG---TTCCCAGTCC 16346
Query 5028 GGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080
| | ||| | | | |||||| |||||| ||||| || || ||||| ||
Sbjct 16345 TGAATATCCTGGGCCAGATCAACCTCTTCAGTTGTCCAGAAAGAAGCTTCAGC 16293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049188831307
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |