Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq22 208 7e-49 >seq22 Length=83673 Score = 208 bits (230), Expect = 7e-49 Identities = 552/833 (66%), Gaps = 15/833 (2%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||||| || || || ||||| ||||||||||| || || || | || |||||||| Sbjct 17119 TTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTTACCAGCCAATGAAATATTC 17060 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTAGAGCTACAAG 4375 ||||| ||||| || ||||| | | ||||| | || ||| || | |||||| || Sbjct 17059 TCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTTCTGACCCAA-AGCTACGAG 17001 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435 || || ||||| ||||| || | ||||||| |||| | ||| || || || | || Sbjct 17000 CAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTCGGCATTCATACCGAGTAG 16941 Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 || ||||| | || | | | || |||| || || ||| || ||||| || | || Sbjct 16940 ACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATCGACTGCTTCAGTAAGAAT 16881 Query 4496 ATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAA 4555 | || ||| | | |||| | || | || | | | | | ||| || || Sbjct 16880 ACGTTCTATAACAAAAGGTGCTGGTCTGTTCTCCAAATGGCTGTAAAGGAGACAAGCGAA 16821 Query 4556 ATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCAT 4615 ||| ||| | ||| ||||| | ||||| |||||| || || || || ||||| Sbjct 16820 ATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCGTTACTGAAGGTCAAACCCGGCAT 16761 Query 4616 TAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTC 4675 | || | |||||| ||||| || ||||| ||||| || || || ||||| | || || Sbjct 16760 AAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAAGGATCCTGAGAAGAAAACACCCTC 16701 Query 4676 TACGGCGGCAAACGCTACTAATCGGGACCCGAA-CGAGCTGGCTTTGTCTTTAATCCATT 4734 || || || || || |||| ||| |||| | |||| || ||| ||||||| Sbjct 16700 AACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACTAGCTTCCTC-GTCAGTAATCCAGC 16642 Query 4735 TTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATT 4794 | ||||| || || || |||| || | ||||| ||| | || || | ||| || Sbjct 16641 GAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAATCGTGAAAATGGCATCAAA-AAGG 16583 Query 4795 TACTTTT-TTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAA 4853 ||| ||| | || | | |||||||| || || || || ||||||||||| Sbjct 16582 AACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATAAGCAGACTGTACATTTCAGAG 16523 Query 4854 TGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACT 4913 || || || || || |||||| |||||||||||||| | || || | | ||| Sbjct 16522 TGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCACTTGGCCTCAGAGATACCAACG 16463 Query 4914 TCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAAC 4973 || ||| || || || ||||| || || || ||||||||||| || ||||||||| Sbjct 16462 TCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATACCGTCACTAGCGGCAAAAAAC 16403 Query 4974 GCCAAAACATGAGATATAAAGTACTGT---TCGTCA---GGCTTAAGTTTTTTCCAGTGG 5027 || | ||| | || |||||||| || |||||| || |||| || ||||| Sbjct 16402 GCTAGAACTCGTGAAATAAAGTAACGTTCATCGTCATTCAGCCTAAG---TTCCCAGTCC 16346 Query 5028 GGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 | | ||| | | | |||||| |||||| ||||| || || ||||| || Sbjct 16345 TGAATATCCTGGGCCAGATCAACCTCTTCAGTTGTCCAGAAAGAAGCTTCAGC 16293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049188831307