Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq66 417 1e-111 seq22 232 9e-56 >seq66 Length=396251 Score = 417 bits (462), Expect = 1e-111 Identities = 1390/2135 (65%), Gaps = 57/2135 (3%) Strand=Plus/Plus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || |||||||| | | || ||||| | || || ||||| |||||||||||||| | | Sbjct 305861 GTGAACTGAATAGCGGCAGCTGCGGCCTGAGTGCGCAGATAATACATACCAGTTTTCAAA 305920 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGA-ATAACTAGGATCGGCTAT 76900 ||| | ||| |||||||||||||| || || || || ||| | || | || || Sbjct 305921 CCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTACCCATAGTTGGGGCCTGC-AT 305979 Query 76901 ATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTAT 76960 | |||||||| |||||| || || ||||||| || | | | || ||||| | || Sbjct 305980 GTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGCAGCCATATCAAT 306039 Query 76961 AATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA- 77019 ||||||||| ||| |||||||| | || ||| | | | || ||||| | |||| Sbjct 306040 AATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAATATCCTGAGGAAT 306099 Query 77020 ----GGTTTGTATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCA 77075 | ||| ||| ||| ||||||||| || || | | ||||||| |||||||| Sbjct 306100 CGAGGCGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTCTTCATATCATCG 306157 Query 77076 TTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCT 77135 ||||| | | | || | | | || |||| |||||||| ||||| ||||| Sbjct 306158 TTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACGATTTGGAATTCA 306217 Query 77136 CCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTT 77195 |||| ||| ||||| | || ||| | || ||| | || || | | ||||||||| Sbjct 306218 CCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAACATTCATTGTAG 306277 Query 77196 CCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGA 77255 || || ||||||| |||||||||||| ||||||||||| || | | ||| | | | Sbjct 306278 CCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGGGAATTACGCAAA 306337 Query 77256 CCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACA 77315 |||| | ||| | |||| | | | ||| ||||| | || | |||| ||| Sbjct 306338 CCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCAGTAGGTGTAACG 306397 Query 77316 TCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAA 77375 ||||||||||||| || || | |||| || | || || |||||| Sbjct 306398 CCCCAAAGATCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGCCTTCGTAAGTCTCATAA 306457 Query 77376 GGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCG 77435 || || || | ||| | || | ||||| | ||| | | ||| || || || Sbjct 306458 GGACCATCAACCTTAGCAATCTCGATAGAAGCTTCAACAGCTGCATGATATATGGTCTCA 306517 Query 77436 AAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATA 77495 || |||| |||| || ||||| || || ||||| || || || ||| Sbjct 306518 AATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAAAAGGCA---GTCTGAGCATA 306574 Query 77496 AAG---GCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAA 77552 ||| |||||||| || || | ||| || | | |||| |||||||| | | | |||||| Sbjct 306575 AAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGTCTATGACGCATGTTGGAA 306634 Query 77553 ATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACA 77612 ||| ||||| | ||| || ||||| | || ||||||| ||| | | || ||| Sbjct 306635 CGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATTTGATTCA-AGTTATAAGT 306693 Query 77613 ACTAC-TTTAACCACGTC---------CTTTAGTTTA---AGAAAATCAA-ATCTTCCAT 77658 || ||| || || || ||| | | | |||| | || ||| | | Sbjct 306694 GATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAGAACACCATCATCCTTTGT 306753 Query 77659 CTATAACAAA--CATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGC 77716 || || |||| || | | ||| | || || |||||||| || || || | || Sbjct 306754 CTTTA-CAAAGGCAGGG--AGAGCAACTGAAGCCAGATTACATACAGCAGTTTCCTCAGG 306810 Query 77717 GTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTG 77776 | | || | | || || || | |||| || |||||||| || ||||| | Sbjct 306811 ACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGATAGTACCAAGATTACG 306870 Query 77777 TTGGTTGCTCTTTTTATT-GCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAA 77835 || || ||||| || || ||| ||||||||||| || || ||| | || || ||| Sbjct 306871 CTGATTACTCTTGCGGTTAGCCTGA-TCCTTATAAAGCATGAAAGGATTACCTGTCTCAG 306929 Query 77836 TCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATA----GATTTGTA 77890 | || | ||| | ||| | | ||| | | ||| |||||| || || || | || Sbjct 306930 TTTGAGCTTCCAAAATGGCGTACCAAA-GCTTCTGAGCTTTGATGGTACGACGACCTTTA 306988 Query 77891 TCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATC 77950 | | | |||||| | || || ||| ||| |||||||| || |||||||| | Sbjct 306989 CC----CATACGTTCATAACGTGTGTAAAGCTCTTCGAATTCATCACCATAAACATCAGC 307044 Query 77951 CAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTT 78010 | ||||||||||| || || |||||||||| ||| || ||||| |||||||| || Sbjct 307045 AAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCAGACTTAACTCTCTT 307104 Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070 ||| || | ||||| ||||| ||||| | ||| ||||| |||| | |||||| || Sbjct 307105 CATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCACGGACTTCTTCCTT 307164 Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130 || || ||||| |||||||| || || | || |||| |||||| ||||| ||||| Sbjct 307165 ACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGCCAGGGTTCAAGATA 307224 Query 78131 TATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATT 78190 || || | | | || || ||||| || || |||||||| | ||| | || |||||||| Sbjct 307225 AATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAACGAGCAGTGTTATT 307284 Query 78191 ATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACT 78250 | || | | |||||||| ||||||||| ||||| || || || || | || ||| Sbjct 307285 GAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTACCGGCGATGTAAGA 307344 Query 78251 TCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAG 78310 ||| | || || ||||| || | || || || || || ||||| || || Sbjct 307345 ACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCAGATTTAGAAATAAG 307404 Query 78311 AGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAG 78370 ||| ||| ||| | ||||| || || || || ||| ||| || ||||| || ||| Sbjct 307405 AGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCTTTCATGCAAACAAG 307464 Query 78371 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATG 78430 ||||| | ||||||| | ||| || ||||| | || || ||||| || || Sbjct 307465 GAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAAGTGGGAGAAGCGTG 307524 Query 78431 CGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAAT-AGCTGATTCTATGTCCCATT 78489 || || | || | || | | | ||||||||| || | || | |||| | Sbjct 307525 GGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTA-GGGATGTTAAAAC 307583 Query 78490 GATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTC--AACCGTCTTATT 78547 ||| || || | || || | ||| | ||||||||| || | ||| | | | | Sbjct 307584 CATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGTTCGTGAACAAC--ACC 307641 Query 78548 ATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 78607 ||| | ||||| |||||| || | ||| ||||| ||||| || || |||||| || Sbjct 307642 ATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCGAAGTAATTGTATTTGAA 307701 Query 78608 GTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCAT 78667 || | || |||| || ||| || | || | | | || | || | | ||| Sbjct 307702 ATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGCTTCTTGACGA-CTTCAT 307760 Query 78668 GACAGTAGT-TGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATA 78726 || | | ||||| ||||| || | | | ||| | || ||||||||| | ||| Sbjct 307761 GAACCTCTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGGGGTTAACATAGGTGTATA 307820 Query 78727 AATCTTCCATTACATCACT-AAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCT 78785 ||| || | || | ||| ||| || | ||| || | |||||| || ||||| | ||| Sbjct 307821 GATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTGTGAAGGTTAGAAATAGCA 307879 Query 78786 ATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCT 78845 || | |||||| |||| |||||| ||||||||||| || || | | || || |||| Sbjct 307880 ATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTCATACTAGCAGCAGTTTCA 307939 Query 78846 GCCGCTAAAATATCTAACTCTATAGTTGTGACCCC 78880 || || | | || | ||||| ||| ||||| || Sbjct 307940 GCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 307974 >seq22 Length=83673 Score = 232 bits (256), Expect = 9e-56 Identities = 597/901 (66%), Gaps = 14/901 (2%) Strand=Plus/Minus Query 47831 TTGAGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTT 47890 || ||||||||| || ||||| || || ||||| |||||||| ||||| || || Sbjct 17138 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 17079 Query 47891 GCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAttttttt 47950 || ||||||| ||||| ||||| ||||| || ||||| | |||| || | || || Sbjct 17078 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 17019 Query 47951 AAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTC 48010 || || || | ||||||||| || || || || | ||| ||||| | || Sbjct 17018 CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTC 16959 Query 48011 ACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGT 48070 |||||| || | || | || || | ||| || | | |||| || || ||| Sbjct 16958 GGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATC 16899 Query 48071 GACAGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGA---TACAACAAATG 48127 ||| || || | || | ||| | | | | || ||| | | |||||| Sbjct 16898 GACTGCTTCAGTAAGAAT--ACGTT-CTATAACAAAAGGTGCTGGTCTGTTCTCCAAATG 16842 Query 48128 TTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTT 48187 | | | | ||| || ||||| ||||||||| || || | | ||| || ||||| Sbjct 16841 GCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCGTT 16782 Query 48188 AGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGA 48247 | || || | ||| ||||| || ||||| ||||||||||| || || || || || || Sbjct 16781 ACTGAAGGTCAAACCCGGCATAAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAAGGA 16722 Query 48248 TCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC 48307 ||| || ||||| | || || || || || |||||| |||| ||| || |||| || Sbjct 16721 TCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACTAGC 16662 Query 48308 TTCGTTGT--GTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGT 48364 ||| | || ||| |||| || | ||||| | |||||||||| | ||| || || Sbjct 16661 TTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAATCGT 16602 Query 48365 TTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAA 48424 || |||| ||| || || | ||| || | || || |||||||| || || | Sbjct 16601 GAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATAAG 16542 Query 48425 AAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCT 48484 ||||| |||||||| |||||||| || || || ||||| ||||||||||| || | Sbjct 16541 CAGACTGTACATTTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCACTT 16482 Query 48485 CGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCC 48544 || || | ||| || || |||| || | | |||| |||||||| || || || Sbjct 16481 GGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATACC 16422 Query 48545 ATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAG 48604 |||||||| |||||||| |||| || || |||||| || ||| | | | |||| Sbjct 16421 GTCACTAGCGGCAAAAAACGCTAGAACTCGTGAAATAAAGTAACGTTCATCGTCATTCAG 16362 Query 48605 TTTA---TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGA 48661 || | |||||| | ||||| | | | ||| || ||||||| |||||| || || Sbjct 16361 CCTAAGTTCCCAGTCCTGAATATCCTGGGCCAGATCAACCTCTTCAGTTGTCCAGAAAGA 16302 Query 48662 TGCCTCTGCTTTTTTATACATATTCCATATA-TCACTGTATTGGATTGGGAAAATAACAA 48720 || || || | ||||| | ||| ||| || | ||| | ||| || || | ||||| Sbjct 16301 AGCTTCAGCCTGCTTATAAGCCTGCCAGATACTCTC-GTACTCGATAGGAAAGAGAACAA 16243 Query 48721 A 48721 | Sbjct 16242 A 16242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668114014560