Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq66 407 2e-108 seq22 269 4e-67 >seq66 Length=396251 Score = 407 bits (450), Expect = 2e-108 Identities = 1354/2078 (65%), Gaps = 49/2078 (2%) Strand=Plus/Plus Query 75376 CGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAG 75435 |||||||||||| | | | ||| | | || || ||||| |||||||||||||| | Sbjct 305860 CGTGAACTGAATAGCGGCAGCTGCGGCCTGAGTGCGCAGATAATACATACCAGTTTTCAA 305919 Query 75436 ACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGA-ATAACTCGGATCGGCTA 75494 |||| | ||| |||||||||||||| || || || || ||| | || | || | Sbjct 305920 ACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTACCCATAGTTGGGGCCTGC-A 305978 Query 75495 TATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTA 75554 | | |||||||| |||||| || || ||||||| || | | | || ||||| | | Sbjct 305979 TGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGCAGCCATATCAA 306038 Query 75555 TAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614 |||||||||| ||| |||||||| | || ||| | | | || ||||| | |||| Sbjct 306039 TAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAATATCCTGAGGAA 306098 Query 75615 --GATTTG-TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCAT 75671 || | | | || ||| || || ||| | || | | ||||||| || ||||| | Sbjct 306099 TCGAGGCGATGTCTTTAATAGAACCACCACTTGCAATCAATCTATTCTTCATATCATCGT 306158 Query 75672 TCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTC 75731 |||| | | || | | | || |||| |||||||| ||||| ||||| | Sbjct 306159 TCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACGATTTGGAATTCAC 306218 Query 75732 CAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTC 75791 ||| ||| ||||||| || ||| | || ||| | || || | | ||||||||| | Sbjct 306219 CAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAACATTCATTGTAGC 306278 Query 75792 CCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGAC 75851 | || ||||||| ||| |||||||| ||||||||||| || | | ||| | | || Sbjct 306279 CTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGGGAATTACGCAAAC 306338 Query 75852 CATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACAT 75911 ||| | ||| | |||| | | | ||| ||||| | || | ||| ||| Sbjct 306339 CATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCAGTAGGTGTAACGC 306398 Query 75912 CCCAGAGATCGTATTGTAGAA----TTCCGTTGCTAGCATATGATCCATTATATGTTTCG 75967 |||| |||||||| || ||||| || || | || || | || || || Sbjct 306399 CCCAAAGATCGTAGGAAAGCTGACCTTCCGAAGC-AGGAC-TG--CCTTCGTAAGTCTCA 306454 Query 75968 TAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTT 76027 |||| || || | ||| | ||| | || || | || | | ||| || || Sbjct 306455 TAAGGACCATCAACCTTAGCAATCTCGATAGAAGCTTCAACAGCTGCATGATATATGGTC 306514 Query 76028 TCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAA-AG 76086 || || |||| ||||||| ||||| || || | |||||||| | | | | | Sbjct 306515 TCAAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAAAAGGC-AGTCTGAGCAT 306573 Query 76087 AATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146 || || |||||||| | || | ||| || | | |||| |||||||| | | | ||||| Sbjct 306574 AAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGTCTATGACGCATGTTGGA 306633 Query 76147 AATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTC---T 76203 | ||| ||||| | |||||| ||||| |||| ||||||| ||| | || | Sbjct 306634 ACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATTTGATTCAAGTTATAAGT 306693 Query 76204 GACA------ACTACTTTAACCACGTCCTTTAGTTT---GAGAAAATCAA-ATTTTCCAT 76253 || | || || | | || | ||| | | ||||| | || || | | Sbjct 306694 GATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAGAACACCATCATCCTTTGT 306753 Query 76254 CTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCAT 76313 || | ||||| | ||||| | || || |||||||| || || || | || | Sbjct 306754 CTTT-ACAAAGGCAGGGAGAGCAACTGAAGCCAGATTACATACAGCAGTTTCCTCAGGAC 306812 Query 76314 TGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTT 76373 | | || | | || || ||| | |||| || ||||||||| |||||||| | | Sbjct 306813 TAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGATAGTACCAAGATTACGCT 306872 Query 76374 GGTTGCTCTTTTTGTTA-CATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATC 76432 | || ||||| |||| | ||| ||||||||||| | || ||| | || || ||| | Sbjct 306873 GATTACTCTTGCGGTTAGCCTGA-TCCTTATAAAGCATGAAAGGATTACCTGTCTCAGTT 306931 Query 76433 TGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATTATA----GATTTGTATC 76487 || | ||| | ||| | | ||| | | ||| |||||| || || || | || | Sbjct 306932 TGAGCTTCCAAAATGGCGTACCAAA-GCTTCTGAGCTTTGATGGTACGACGACCTTTACC 306990 Query 76488 GCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCA 76547 | | |||||| |||| || | | ||| |||||||| || |||||||| | | Sbjct 306991 CATACG----TTCATAACGTGTGTAAAGCTCTTCGAATTCATCACCATAAACATCAGCAA 307046 Query 76548 AACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCA 76607 |||||| ||||| || ||||||||||||| |||||| ||||| |||||| | |||| Sbjct 307047 GACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCAGACTTAACTCTCTTCA 307106 Query 76608 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTC 76667 | || | ||||| ||||| ||||| | ||| ||||| |||| | |||||| || | Sbjct 307107 TGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCACGGACTTCTTCCTTAC 307166 Query 76668 CTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 76727 | || ||||| |||||| | ||| || | || |||| |||||| ||||| ||||| | Sbjct 307167 CAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGCCAGGGTTCAAGATAAA 307226 Query 76728 TCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTAT 76787 | || | | |||| || ||||| || || |||||||| | ||| | ||||||||||| Sbjct 307227 TAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAACGAGCAGTGTTATTGA 307286 Query 76788 AAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTC 76847 | || | | |||||||| ||| ||||| |||||||| || || || | || ||| | Sbjct 307287 AGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTACCGGCGATGTAAGAAC 307346 Query 76848 CACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAG 76907 || ||||| ||||| || | || || || || || || |||||| || |||| Sbjct 307347 CAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCAGATTTAGAAATAAGAG 307406 Query 76908 CACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAA 76967 |||| ||| | || ||||| ||||| || ||| || || ||||| || ||| | Sbjct 307407 CACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCTTTCATGCAAACAAGGA 307466 Query 76968 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAG 77027 |||| | ||||||| | ||| || ||||| |||| || ||||| || || | Sbjct 307467 AACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAAGTGGGAGAAGCGTGGG 307526 Query 77028 TGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTT--CTATATCCCATTG 77085 |||| | || | || | | | ||||||||| || || ||| || | | Sbjct 307527 TGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGAC--CTTAGGGATGTTAAAACC 307584 Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATT 77145 ||| || || | ||| || | ||| | ||||||||| || ||||| | | ||| Sbjct 307585 ATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGTTCGTGAACAACACCATT 307644 Query 77146 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 77205 | ||||| |||||| || | ||| ||||| ||||| || || |||||| || || Sbjct 307645 AAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCGAAGTAATTGTATTTGAAATC 307704 Query 77206 TCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGAC 77265 | | |||| || | | || | || | || || | || | | ||||| Sbjct 307705 ACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGCTTCTTGACGA-CTTCATGAA 307763 Query 77266 AGTGGT-AGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGT 77324 | | |||||| || || || | | ||| | || ||||||||| | ||| | Sbjct 307764 CCTCTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGGGGTTAACATAGGTGTATAGAT 307823 Query 77325 CTTCCATTACGTCGCT-AAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATT 77383 | || | || | || ||| || | ||| || | |||||| || || || | || || Sbjct 307824 CCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTGTGAAGGTTAGAAATAGCAATA 307882 Query 77384 CTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGT 77421 | ||||| |||| ||||||||||||||||| || || Sbjct 307883 CGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGT 307920 >seq22 Length=83673 Score = 269 bits (298), Expect = 4e-67 Identities = 602/897 (67%), Gaps = 14/897 (2%) Strand=Plus/Minus Query 46324 GACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCT 46383 |||||||| || |||||||| || ||||| |||||||| ||||| || || || Sbjct 17134 GACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTTACCA 17075 Query 46384 TCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAAT 46443 ||||||| ||||| ||||| ||||| || ||||| | ||||| || | || || Sbjct 17074 GCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTTCTGA 17015 Query 46444 CCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAA 46503 || || || | ||||||||| || || || || | |||| ||||| | || | Sbjct 17014 CCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTCGGCA 16955 Query 46504 TTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACA 46563 ||||| || | || |||| || | ||| || | | |||| || |||||| ||| Sbjct 16954 TTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATCGACT 16895 Query 46564 GCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGA---TGCATCAAATGTTTA 46620 || || | | || | ||| || | | | || ||| | | |||||| | Sbjct 16894 GCTTCAGTAAGAAT--ACGTT-CTATAACAAAAGGTGCTGGTCTGTTCTCCAAATGGCTG 16838 Query 46621 AACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAA 46680 | | | ||| || ||||| |||||| || || || | | ||| || |||||| Sbjct 16837 TAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCGTTACTG 16778 Query 46681 AATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCA 46740 || || | || ||||| || ||||||||||||||||| || ||||| || || ||||| Sbjct 16777 AAGGTCAAACCCGGCATAAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAAGGATCCT 16718 Query 46741 GAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGG---CA 46797 || ||||| | || || ||||| ||||||||||| |||| ||| || |||| | | Sbjct 16717 GAGAAGAAAACACCCTCAACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACTAGCTTCC 16658 Query 46798 TCATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCT 46857 || | | |||||| | ||||||| | ||||| |||| | ||| || || Sbjct 16657 TCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAATCGTGAAA 16598 Query 46858 ATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGA 46917 || |||| ||| || || | ||| | | | || || || || || || || | ||| Sbjct 16597 ATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATAAGCAGA 16538 Query 46918 CTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCT 46977 || |||||||| || |||||||| || || ||||| ||||||||||| || | || Sbjct 16537 CTGTACATTTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCACTTGGCC 16478 Query 46978 TCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCA 47037 |||| || || || |||| || | | ||| ||||||||||| || || ||| Sbjct 16477 TCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATACCGTCA 16418 Query 47038 CTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTA 47097 ||||| |||||||| || | || || |||||| || ||||||| | |||| || Sbjct 16417 CTAGCGGCAAAAAACGCTAGAACTCGTGAAATAAAGTAACGTTCATCGTCATTCAGCCTA 16358 Query 47098 ---TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCC 47154 | |||||| | ||||| | | | ||| || ||||||| ||||||||| || || Sbjct 16357 AGTTCCCAGTCCTGAATATCCTGGGCCAGATCAACCTCTTCAGTTGTCCAGAAAGAAGCT 16298 Query 47155 TCTGCTTTTTTATACATATTCCATATA-TCACGATATTGGATCGGAAAAATAACAAA 47210 || || | ||||| | ||| ||| || || || | ||| ||||| | |||||| Sbjct 16297 TCAGCCTGCTTATAAGCCTGCCAGATACTCTCG-TACTCGATAGGAAAGAGAACAAA 16242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933695977280