Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq3 100 7e-16 seq34 98.7 2e-15 seq23 89.7 1e-12 >seq3 Length=255871 Score = 100 bits (110), Expect = 7e-16 Identities = 152/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| |||||||| ||||||||||| || | | || | |||||||| | Sbjct 112791 CAAG-TGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAA 112733 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || ||||||||||| | || ||||| | | || |||||||| || || Sbjct 112732 GCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACTAA 112673 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 |||| || || | ||| | | |||| || | || || || || || ||||| || Sbjct 112672 TTTTGCTCTTTACGGCCTCAATGGTGTCATTGGA--TTCAACCTCGAGGGTGATAGTCTT 112615 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || |||||||| | ||| | ||||||||| Sbjct 112614 TCCTGTTAGAGTCTTGATGAAAATCTGCATTTT 112582 >seq34 Length=648589 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||| ||| ||||| || ||||||||||| || | | || | ||||| || | Sbjct 446337 CAAG-TGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGA 446395 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || |||||||| | | ||||||||| | | || |||||||| || | Sbjct 446396 GCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGA 446455 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||||| ||| | | |||| | ||| || || || |||||||| || | Sbjct 446456 TCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTTC 446515 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||| | ||||| | ||| | ||||||||| Sbjct 446516 CCGTCAACGTCTTTATGAAAATCTGCATTTT 446546 >seq23 Length=679897 Score = 89.7 bits (98), Expect = 1e-12 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| ||||| ||||| || |||||||| || |||| | ||| | || || Sbjct 614890 GAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTC 614949 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || ||||||||||| | ||||||||| | | || |||||||| || Sbjct 614950 CTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTC 615009 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || |||| || | | | || | ||| ||||||||||| ||||| Sbjct 615010 GCTGATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGT 615069 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTA 152108 || || || | ||||| | |||| |||||| ||| Sbjct 615070 CTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTTA 615106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819632117009