Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq34 190 4e-43
seq3 158 3e-33
seq23 141 2e-28
>seq34
Length=648589
Score = 190 bits (210), Expect = 4e-43
Identities = 184/234 (79%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| |||| || | ||| || || ||||||||||||||||
Sbjct 446316 ACCACCACGGAGACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGA 446375
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || ||||| || || ||||||||||| || |||||| ||
Sbjct 446376 AAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGG 446435
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|||||| |||||||| |||| |||||||| || | ||||| ||||| || || |
Sbjct 446436 AATACCTTCCTTGTCGCTGATC-TTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAA 446494
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCA 283104
| ||||| || || ||||| |||||||| ||||| | ||| |||||||||||||
Sbjct 446495 CCTCGAGGGTAATAGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCATTTTCA 446548
>seq3
Length=255871
Score = 158 bits (174), Expect = 3e-33
Identities = 175/231 (76%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| ||||| || || || |||| || | ||| ||||| ||||||||||||||||
Sbjct 112811 CCGCCACGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAG 112752
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||||||||| || || ||||| || || ||||| | ||||||||||||| |||
Sbjct 112751 AGGGTGCGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGA 112692
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||| ||||| || || |||||| ||||||| || || ||||| | ||| ||
Sbjct 112691 ATACCTTCCTTATCACTAAT-TTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAAC 112633
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||||| ||||| ||||| || || | |||||| | ||| |||||||||||
Sbjct 112632 CTCGAGGGTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCATTTT 112582
>seq23
Length=679897
Score = 141 bits (156), Expect = 2e-28
Identities = 172/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||| || || |||| ||| | ||| || || |||||||| || || |
Sbjct 614875 ACCACCACGCAAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGA 614934
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||| ||||| || || || || || ||||| | ||| || |||||| ||
Sbjct 614935 AAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 614994
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|||||| |||||||| |||| ||||| || || | ||||| || || || || |
Sbjct 614995 AATACCTTCCTTGTCGCTGATC-TTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCA 615053
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|||| |||||||| ||||| || ||||| ||||| | || |||||||| ||
Sbjct 615054 CTTCAAGAGTGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTT 615105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738140503666
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |