Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq34 190 4e-43 seq3 158 3e-33 seq23 141 2e-28 >seq34 Length=648589 Score = 190 bits (210), Expect = 4e-43 Identities = 184/234 (79%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| |||| || | ||| || || |||||||||||||||| Sbjct 446316 ACCACCACGGAGACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGA 446375 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || ||||| || || ||||||||||| || |||||| || Sbjct 446376 AAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGG 446435 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||| |||||||| |||| |||||||| || | ||||| ||||| || || | Sbjct 446436 AATACCTTCCTTGTCGCTGATC-TTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAA 446494 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCA 283104 | ||||| || || ||||| |||||||| ||||| | ||| ||||||||||||| Sbjct 446495 CCTCGAGGGTAATAGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCATTTTCA 446548 >seq3 Length=255871 Score = 158 bits (174), Expect = 3e-33 Identities = 175/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || |||| || | ||| ||||| |||||||||||||||| Sbjct 112811 CCGCCACGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAG 112752 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || ||||| || || ||||| | ||||||||||||| ||| Sbjct 112751 AGGGTGCGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGA 112692 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| ||||| || || |||||| ||||||| || || ||||| | ||| || Sbjct 112691 ATACCTTCCTTATCACTAAT-TTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAAC 112633 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| ||||| || || | |||||| | ||| ||||||||||| Sbjct 112632 CTCGAGGGTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCATTTT 112582 >seq23 Length=679897 Score = 141 bits (156), Expect = 2e-28 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| || || |||| ||| | ||| || || |||||||| || || | Sbjct 614875 ACCACCACGCAAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGA 614934 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || || || ||||| | ||| || |||||| || Sbjct 614935 AAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 614994 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||| |||||||| |||| ||||| || || | ||||| || || || || | Sbjct 614995 AATACCTTCCTTGTCGCTGATC-TTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCA 615053 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 |||| |||||||| ||||| || ||||| ||||| | || |||||||| || Sbjct 615054 CTTCAAGAGTGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTT 615105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738140503666