Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq78 289 3e-73
seq22 114 1e-20
>seq78
Length=554
Score = 289 bits (320), Expect = 3e-73
Identities = 224/264 (85%), Gaps = 3/264 (1%)
Strand=Plus/Plus
Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403
|||||| ||||||||||||||||||||||||||| ||||| ||||||||||| ||||
Sbjct 95 TCTCACCCTGTTGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCA 154
Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAA 8463
|| |||||||||| || |||||||||||||||||||| |||||| ||||| ||||||
Sbjct 155 CCACCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGGTGGGACCACAGGCTT 214
Query 8464 AAGCCACCACGCCAAGCTAA-TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTG 8522
|||||||| | |||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct 215 GTGCCACCACAGCCAGCTAATTTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTA 274
Query 8523 GCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTG 8582
| |||| || |||||| |||||||||| ||||||| | |||| |||| ||||||||
Sbjct 275 GACAGGATGTTCTCGATCTCCTGACCT--TGTGATCTGCTCACCTCAGCCTGCCAAAGTG 332
Query 8583 CTGGGATTACAGGCATGAGCCACC 8606
||||||||||||||||||||| ||
Sbjct 333 CTGGGATTACAGGCATGAGCCGCC 356
>seq22
Length=83673
Score = 114 bits (126), Expect = 1e-20
Identities = 290/438 (66%), Gaps = 6/438 (1%)
Strand=Plus/Minus
Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567
||| || ||||| ||| || || || || | | |||||| || ||| || || ||
Sbjct 16829 ACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCGTTACTGAAGGTCAA 16770
Query 23568 TCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAA 23627
|| ||||| | || || ||||| | ||| || || |||||||| ||||| || |||||
Sbjct 16769 ACCCGGCATAAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAAGGATCCTGAGAAGAA 16710
Query 23628 AATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGA 23687
|| |||||||||||| || || || || || || | | || | || | | ||||
Sbjct 16709 AACACCCTCAACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACTAGCTTCCTCGTCAGT 16650
Query 23688 AATCCAtttttttGTCCAATTAGCCTTCAATTTTACA---CACTCAATTGTTTCAATTGC 23744
|||||| | ||| || |||||| || | | || ||| || ||| ||
Sbjct 16649 AATCCAGCGAAGAGCCCACTTGGCCTTC--TTCTGAATGGCA-GGAATCGTGAAAATGGC 16593
Query 23745 TTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATA 23804
| || || || ||| | | | || | | || || ||||| || | ||| ||
Sbjct 16592 ATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATAAGCAGACTGTA 16533
Query 23805 CATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGA 23864
||||||||| ||||| || || || |||||| || || ||||| || | || |||||
Sbjct 16532 CATTTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCACTTGGCCTCAGA 16473
Query 23865 CAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGC 23924
| ||| ||| || || || | | || || || || |||||||| ||||||||
Sbjct 16472 GATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATACCGTCACTAGC 16413
Query 23925 AGCAAAGAAAGCAAGAAC 23942
||||| || || |||||
Sbjct 16412 GGCAAAAAACGCTAGAAC 16395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487485030600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |