Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq78 289 3e-73 seq22 114 1e-20 >seq78 Length=554 Score = 289 bits (320), Expect = 3e-73 Identities = 224/264 (85%), Gaps = 3/264 (1%) Strand=Plus/Plus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 |||||| ||||||||||||||||||||||||||| ||||| ||||||||||| |||| Sbjct 95 TCTCACCCTGTTGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCA 154 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAA 8463 || |||||||||| || |||||||||||||||||||| |||||| ||||| |||||| Sbjct 155 CCACCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGGTGGGACCACAGGCTT 214 Query 8464 AAGCCACCACGCCAAGCTAA-TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTG 8522 |||||||| | |||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct 215 GTGCCACCACAGCCAGCTAATTTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTA 274 Query 8523 GCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTG 8582 | |||| || |||||| |||||||||| ||||||| | |||| |||| |||||||| Sbjct 275 GACAGGATGTTCTCGATCTCCTGACCT--TGTGATCTGCTCACCTCAGCCTGCCAAAGTG 332 Query 8583 CTGGGATTACAGGCATGAGCCACC 8606 ||||||||||||||||||||| || Sbjct 333 CTGGGATTACAGGCATGAGCCGCC 356 >seq22 Length=83673 Score = 114 bits (126), Expect = 1e-20 Identities = 290/438 (66%), Gaps = 6/438 (1%) Strand=Plus/Minus Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567 ||| || ||||| ||| || || || || | | |||||| || ||| || || || Sbjct 16829 ACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCGTTACTGAAGGTCAA 16770 Query 23568 TCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAA 23627 || ||||| | || || ||||| | ||| || || |||||||| ||||| || ||||| Sbjct 16769 ACCCGGCATAAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAAGGATCCTGAGAAGAA 16710 Query 23628 AATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGA 23687 || |||||||||||| || || || || || || | | || | || | | |||| Sbjct 16709 AACACCCTCAACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACTAGCTTCCTCGTCAGT 16650 Query 23688 AATCCAtttttttGTCCAATTAGCCTTCAATTTTACA---CACTCAATTGTTTCAATTGC 23744 |||||| | ||| || |||||| || | | || ||| || ||| || Sbjct 16649 AATCCAGCGAAGAGCCCACTTGGCCTTC--TTCTGAATGGCA-GGAATCGTGAAAATGGC 16593 Query 23745 TTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATA 23804 | || || || ||| | | | || | | || || ||||| || | ||| || Sbjct 16592 ATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATAAGCAGACTGTA 16533 Query 23805 CATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGA 23864 ||||||||| ||||| || || || |||||| || || ||||| || | || ||||| Sbjct 16532 CATTTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCACTTGGCCTCAGA 16473 Query 23865 CAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGC 23924 | ||| ||| || || || | | || || || || |||||||| |||||||| Sbjct 16472 GATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATACCGTCACTAGC 16413 Query 23925 AGCAAAGAAAGCAAGAAC 23942 ||||| || || ||||| Sbjct 16412 GGCAAAAAACGCTAGAAC 16395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487485030600