Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq3 138 3e-27 seq34 120 7e-22 seq23 109 1e-18 >seq3 Length=255871 Score = 138 bits (152), Expect = 3e-27 Identities = 162/217 (75%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||| | || ||||| |||||||| || |||||||||||||| ||| Sbjct 112582 AAAATGC---AGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAA 112638 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 | |||||||| ||| ||| || || ||| || || ||||| || ||||| Sbjct 112639 TCCAATGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCT 112698 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 ||||| ||||| ||||||||||| || |||||||| |||||||| | || || | || Sbjct 112699 GACCAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGAC 112758 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131 || ||| |||| ||||| || || || || |||| || Sbjct 112759 TACAACATCCAGAAAGAGTCCACTCTTCA-CTTGGTT 112794 >seq34 Length=648589 Score = 120 bits (132), Expect = 7e-22 Identities = 155/208 (75%), Gaps = 7/208 (3%) Strand=Plus/Minus Query 177912 GTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTG 177971 || ||||||| | |||||| | || || | || ||||| || || ||||||||||| Sbjct 446549 GTGAAAATGC---AGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTT 446493 Query 177972 GAAAGCTCA-GACACCATCGAGAACGTCAAACAAAAGATTCAG-GACAAAGAAGGAATCC 178029 || || | |||||||||||| |||||| ||||| ||| ||||| ||||| || | Sbjct 446492 GAGT-CTAATGACACCATCGAGGCTGTCAAAAGCAAGAT-CAGCGACAAGGAAGGTATTC 446435 Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089 |||| |||||||| || | |||||||| || ||||||||||| ||||| | || ||| Sbjct 446434 CTCCTGACCAGCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTTT 446375 Query 178090 CCGATTATAACGTCCAAAAAGAATCAAC 178117 | || || ||| |||| || || || || Sbjct 446374 CTGACTACAACATCCAGAAGGAGTCCAC 446347 >seq23 Length=679897 Score = 109 bits (120), Expect = 1e-18 Identities = 140/188 (74%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA-GACACCATCGAGAACGTCAAACA 178003 || ||||| || ||||| || || ||||| || | || |||||||| || || Sbjct 615078 ACCGGAAAGACTATCACTCTTGAAGTGGAGT-CTAATGATACCATCGAAGCTGTGAAGAG 615020 Query 178004 AAAGATTCAG-GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| ||| ||||| ||||| || ||||| |||||||| || ||||||||||| || | Sbjct 615019 CAAGAT-CAGCGACAAGGAAGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCA 614961 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || || || | |||||| |||| |||||| |||| || || || || |||| Sbjct 614960 AGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTATAACATCCAGAAGGAGTCCACTCTGC 614901 Query 178123 ATCTTGTT 178130 || | ||| Sbjct 614900 ATTTGGTT 614893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729981598326