Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq3 138 3e-27
seq34 120 7e-22
seq23 109 1e-18
>seq3
Length=255871
Score = 138 bits (152), Expect = 3e-27
Identities = 162/217 (75%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||| | || ||||| |||||||| || |||||||||||||| |||
Sbjct 112582 AAAATGC---AGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAA 112638
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
| |||||||| ||| ||| || || ||| || || ||||| || |||||
Sbjct 112639 TCCAATGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCT 112698
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||| ||||| ||||||||||| || |||||||| |||||||| | || || | ||
Sbjct 112699 GACCAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGAC 112758
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131
|| ||| |||| ||||| || || || || |||| ||
Sbjct 112759 TACAACATCCAGAAAGAGTCCACTCTTCA-CTTGGTT 112794
>seq34
Length=648589
Score = 120 bits (132), Expect = 7e-22
Identities = 155/208 (75%), Gaps = 7/208 (3%)
Strand=Plus/Minus
Query 177912 GTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTG 177971
|| ||||||| | |||||| | || || | || ||||| || || |||||||||||
Sbjct 446549 GTGAAAATGC---AGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTT 446493
Query 177972 GAAAGCTCA-GACACCATCGAGAACGTCAAACAAAAGATTCAG-GACAAAGAAGGAATCC 178029
|| || | |||||||||||| |||||| ||||| ||| ||||| ||||| || |
Sbjct 446492 GAGT-CTAATGACACCATCGAGGCTGTCAAAAGCAAGAT-CAGCGACAAGGAAGGTATTC 446435
Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089
|||| |||||||| || | |||||||| || ||||||||||| ||||| | || |||
Sbjct 446434 CTCCTGACCAGCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTTT 446375
Query 178090 CCGATTATAACGTCCAAAAAGAATCAAC 178117
| || || ||| |||| || || || ||
Sbjct 446374 CTGACTACAACATCCAGAAGGAGTCCAC 446347
>seq23
Length=679897
Score = 109 bits (120), Expect = 1e-18
Identities = 140/188 (74%), Gaps = 4/188 (2%)
Strand=Plus/Minus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA-GACACCATCGAGAACGTCAAACA 178003
|| ||||| || ||||| || || ||||| || | || |||||||| || ||
Sbjct 615078 ACCGGAAAGACTATCACTCTTGAAGTGGAGT-CTAATGATACCATCGAAGCTGTGAAGAG 615020
Query 178004 AAAGATTCAG-GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
||||| ||| ||||| ||||| || ||||| |||||||| || ||||||||||| || |
Sbjct 615019 CAAGAT-CAGCGACAAGGAAGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCA 614961
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
| ||||| || || || | |||||| |||| |||||| |||| || || || || ||||
Sbjct 614960 AGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTATAACATCCAGAAGGAGTCCACTCTGC 614901
Query 178123 ATCTTGTT 178130
|| | |||
Sbjct 614900 ATTTGGTT 614893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203729981598326
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |