Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq34 131 2e-25
seq23 125 7e-24
seq3 113 4e-20
>seq34
Length=648589
Score = 131 bits (144), Expect = 2e-25
Identities = 173/238 (73%), Gaps = 8/238 (3%)
Strand=Plus/Plus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || ||||| | ||||| || | ||| ||||||||| ||||| |||||
Sbjct 446313 ACCACCACCACGGAGACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTC 446372
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|| |||||||| | || |||||||| || || ||||| |||| ||||| ||||| |
Sbjct 446373 AGAAAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGG 446432
Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTT----CAACGACGACACAGTGTCGCTCG 41807
|||| | |||||||| |||| || |||| || | ||| ||||| | |
Sbjct 446433 AGGAATACCTTCCTTGTCGCTGATCTT--GCTTTTGACAGCCTCGATG--GTGTCATTAG 446488
Query 41808 ACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||| ||||| | || || || || ||||||| |||||||| |||||||||||| ||
Sbjct 446489 ACTCAACCTCGAGGGTAATAGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCATTTT 446546
>seq23
Length=679897
Score = 125 bits (138), Expect = 7e-24
Identities = 168/234 (72%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || | ||| | |||| |||||| ||| ||||||||| |||||||| |||||
Sbjct 614876 CCACCACGCAAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAA 614935
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| || ||||||||||| ||||| || || ||||| ||||| | |||
Sbjct 614936 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 614995
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815
| | |||||||| |||| || ||||| | | || || | ||||||||
Sbjct 614996 ATACCTTCCTTGTCGCTGATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACT 615055
Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCG 41869
|| | || || || || || |||| ||||| | || |||||||||||| ||
Sbjct 615056 TCAAGAGTGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTTAACG 615109
>seq3
Length=255871
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || ||||| | |||| || || ||| ||| ||||| ||||| ||||| |||
Sbjct 112811 CCGCCACGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAG 112752
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || ||||| ||||| ||||| || || || |||||||| | |||
Sbjct 112751 AGGGTGCGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGA 112692
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815
| | ||||| || | ||||| ||| | | | | ||||| | || || |||
Sbjct 112691 ATACCTTCCTTATCACTAATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACC 112632
Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|| | || || || || || || || ||||| | |||||||||||| ||
Sbjct 112631 TCGAGGGTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCATTTT 112582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303543474800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |