Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq277 228 1e-54 seq285 165 1e-35 >seq277 Length=119773 Score = 228 bits (252), Expect = 1e-54 Identities = 709/1083 (65%), Gaps = 42/1083 (4%) Strand=Plus/Minus Query 53782 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 53841 |||||||||||| | ||| | || || ||||| ||| |||||||| || || || Sbjct 80827 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 80768 Query 53842 GAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTT 53901 ||| || ||||||| || |||| | || | ||| || | ||| | ||||||| Sbjct 80767 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAAGCTTCTGAGCCTT 80708 Query 53902 TATTATA-GA------TTTGTATCTCTTTTCT--CTT-TCGTATAGTGTATACAATCGTT 53951 ||| || || ||| | | |||||| ||| ||||| || | | Sbjct 80707 TATGGTACGACGGCCCTTTCCAGC-CTTTTCATACTTCTCGTAAAGAGCCT--------- 80658 Query 53952 CAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACC 54011 |||| || ||||| |||| | | | ||||| ||||| | || ||||| | | || Sbjct 80657 CAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCC 80598 Query 54012 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 54071 | || | || | || || || ||||| || ||||| ||||||||||| || || || | Sbjct 80597 AATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAA 80538 Query 54072 GATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 54131 |||| | | | | || || || || ||| || || |||| || | | | Sbjct 80537 GATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACA 80478 Query 54132 TATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCT 54191 ||| ||||||||| || | ||| |||| | | ||||| || ||||| || || | Sbjct 80477 CATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTT 80418 Query 54192 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 54251 | || | ||| | ||| ||||| || || || | |||||| |||| ||| ||||| || | Sbjct 80417 GGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGG 80358 Query 54252 CACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA--CTAATTGATAGACC 54309 || || || || | ||||| ||| | || || || ||| | | ||| | || Sbjct 80357 TTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGA--GCCC 80300 Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369 ||||| || || || ||||| | ||||| | || | ||||| || || ||||| Sbjct 80299 AATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTC 80240 Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA-CATTTGGTGACGACTAGTTC 54428 ||| ||| ||| ||||||| | || || || | || ||| || | ||||| Sbjct 80239 AATAGAATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTC 80181 Query 54429 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 54488 | ||||| | ||||| || || ||||| || || |||| | || | || ||||| | Sbjct 80180 CTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAG 80121 Query 54489 TCTCGATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACAT 54546 |||| | || | ||| || || | |||||| || | | ||| ||||| | ||| Sbjct 80120 TCTCTACGACTTTGGGTATGTC--ATCGCCATGAATACCAATGGAGACGCGCATGATCAT 80063 Query 54547 GTGCTGAGGTCTTTCAACGATCTTGTTG-TTTATTTTCAGCAAGTAGGATTTTTCCAAAG 54605 |||||||| | || || ||| | |||| ||||||||||||||| || | | Sbjct 80062 ATGCTGAGGGCGCTCGT-GAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCG 80004 Query 54606 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTT 54665 |||| ||||||||||||||||| ||||| || || |||| || | |||||||| | Sbjct 80003 TTTTGAAACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCT 79944 Query 54666 TATCCTTATATTTGTTAACTACATCCATGGTAATACTT-----GAAATAATCGGAGAATG 54720 || || || | || || || || |||| | ||||| || |||||||| Sbjct 79943 CTTCAGCATGCTTCTGGACAACGTC----GT-ATACCTCTTGGGAAATCATTGGAGAATG 79889 Query 54721 TTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGttt 54780 || |||| |||||| |||||| || | ||||| || || | || || | ||| Sbjct 79888 CTTGTCATTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTT 79829 Query 54781 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGG 54840 |||||| | |||||| ||||| || || || |||| || || || |||||| || || Sbjct 79828 TTTTGTCTGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGG 79769 Query 54841 ATG 54843 || Sbjct 79768 GTG 79766 Score = 93.3 bits (102), Expect = 5e-14 Identities = 147/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||||||||| || || || |||| || || || ||||||||||| || || || || Sbjct 81816 GTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGC 81757 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTG--GAATAACTCGGATCTGCTA 52925 || | ||| ||||| || |||||||| || || ||| | | |||| ||| | Sbjct 81756 CCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGAT-TGC-A 81699 Query 52926 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 52985 ||| ||| |||| | |||||||| |||||||| | ||| ||| | || ||||| | | Sbjct 81698 TATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGA 81639 Query 52986 TGATCGTCTTTTGTGGAATTTCCCAAA 53012 | ||| |||||| || ||||||| Sbjct 81638 TAATCACCTTTTGACTGATCTCCCAAA 81612 >seq285 Length=150650 Score = 165 bits (182), Expect = 1e-35 Identities = 582/902 (65%), Gaps = 24/902 (3%) Strand=Plus/Plus Query 23859 ACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGGAT 23918 |||||||| || || ||||| || || || | | || || || ||||| || || | Sbjct 138790 ACACGTTTCTCAAAGAAATTGGTCTTTCCAGCAAGAGAGATGTTCTCCATAAAGTCAAAC 138849 Query 23919 GGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCAATCTATCTGCGACA 23978 |||||||| ||||| |||| | || ||||| | | | ||| | || ||||| Sbjct 138850 GGATTGGTCACATTGTAGACGCGCTTGTGGCCCAAAGCCAACAGCAAACGGTCGGCGACG 138909 Query 23979 AACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCC 24038 ||||| | |||| ||||| | || ||||| || | ||| | || || | ||| Sbjct 138910 AACTCGACATATTGGTTCATGAGGTCGGCGTTCATGCCGAGAAGACTTACAGGCAAAGCA 138969 Query 24039 ACA-GTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTC 24097 | | ||| | |||||| ||||| ||| || || || || || ||| | | | Sbjct 138970 TCGCGGAAGTA-TTCTTGCTCAATGTCGACGGCTTCAGTGATGATTC-TCTCAACGATAG 139027 Query 24098 TTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGAC 24156 | || || | | | || || | || | | ||| || |||||| ||| | || Sbjct 139028 CACGGCTAGGGCGGTTCTGCAAGTGGCTGAATAGGAGACAGGCAAAATCGGTGTGCATAC 139087 Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216 |||| || | ||| | ||||||||| || || || || ||||| || |||||||||| Sbjct 139088 CCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAGCCCAGGCATGAGCCCACGCTTTT 139147 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 | ||||| || || || ||||| || ||| ||||| | ||||| || || || |||| Sbjct 139148 TCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAAGACACCTTCAACAGCAGCGAAGG 139207 Query 24277 CAATAAGTCTTTCTCCATA---------ACCGGCGCTGTCATGTATCCACTTTTGAGCCC 24327 |||| || | ||| | | | || ||||| ||||| | |||| Sbjct 139208 CAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCTG------ATCCAACGAAGTGCCC 139261 Query 24328 AATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttttt 24387 | | |||||||| | | || || || || || || || ||| ||| | Sbjct 139262 ACTTAGCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTTGAACAGAAAGTCGGCCT 139321 Query 24388 CATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTT 24447 | ||||| ||||| || ||||||||||||| |||| ||| | || || |||||||||| Sbjct 139322 CTTTACTGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGTCTCAGAGTGAATGTTTT 139381 Query 24448 CAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAA 24507 | || || || || |||||||||||| | ||||||| ||| || || || | Sbjct 139382 CCATCATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAATACCAACCTCACCACTGA 139441 Query 24508 ATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 24567 |||| || | | ||| ||||| || || || ||||| || ||||| || || | ||| Sbjct 139442 ATCGCTCAACGAGATTCTCATTGACAATGCCATCACTAGCAGCAAAGAAAGCAAGAACAC 139501 Query 24568 GTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTT---ATTCCAATCATTGATATCTTTA 24623 | | ||| ||| | ||||| | || | || || | ||| || | | || ||| Sbjct 139502 GGGACACAAAGTATCTCTCGTCATCGT-TCAGCTTGTGCTCCCAGTCGTGAGTGTCCTTA 139560 Query 24624 GATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAG 24683 || || | ||| || | ||||||||||| ||||| || || || || | ||| Sbjct 139561 CCTAGGTCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTTCTTGTAAGCCTGCCAA 139620 Query 24684 ATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATTGGT 24743 || | || | || || || | |||||| | |||||||||| |||||| || Sbjct 139621 ATCGAGTTGTACTTGATCGGGAACAAAACAAACCGGTTTGGATTTTCCTGAAGGATGGGC 139680 Query 24744 TC 24745 || Sbjct 139681 TC 139682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593719410651600