Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq277 228 1e-54
seq285 165 1e-35
>seq277
Length=119773
Score = 228 bits (252), Expect = 1e-54
Identities = 709/1083 (65%), Gaps = 42/1083 (4%)
Strand=Plus/Minus
Query 53782 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 53841
|||||||||||| | ||| | || || ||||| ||| |||||||| || || ||
Sbjct 80827 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 80768
Query 53842 GAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTT 53901
||| || ||||||| || |||| | || | ||| || | ||| | |||||||
Sbjct 80767 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAAGCTTCTGAGCCTT 80708
Query 53902 TATTATA-GA------TTTGTATCTCTTTTCT--CTT-TCGTATAGTGTATACAATCGTT 53951
||| || || ||| | | |||||| ||| ||||| || | |
Sbjct 80707 TATGGTACGACGGCCCTTTCCAGC-CTTTTCATACTTCTCGTAAAGAGCCT--------- 80658
Query 53952 CAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACC 54011
|||| || ||||| |||| | | | ||||| ||||| | || ||||| | | ||
Sbjct 80657 CAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCC 80598
Query 54012 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 54071
| || | || | || || || ||||| || ||||| ||||||||||| || || || |
Sbjct 80597 AATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAA 80538
Query 54072 GATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 54131
|||| | | | | || || || || ||| || || |||| || | | |
Sbjct 80537 GATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACA 80478
Query 54132 TATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCT 54191
||| ||||||||| || | ||| |||| | | ||||| || ||||| || || |
Sbjct 80477 CATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTT 80418
Query 54192 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 54251
| || | ||| | ||| ||||| || || || | |||||| |||| ||| ||||| || |
Sbjct 80417 GGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGG 80358
Query 54252 CACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA--CTAATTGATAGACC 54309
|| || || || | ||||| ||| | || || || ||| | | ||| | ||
Sbjct 80357 TTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGA--GCCC 80300
Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369
||||| || || || ||||| | ||||| | || | ||||| || || |||||
Sbjct 80299 AATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTC 80240
Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA-CATTTGGTGACGACTAGTTC 54428
||| ||| ||| ||||||| | || || || | || ||| || | |||||
Sbjct 80239 AATAGAATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTC 80181
Query 54429 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 54488
| ||||| | ||||| || || ||||| || || |||| | || | || ||||| |
Sbjct 80180 CTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAG 80121
Query 54489 TCTCGATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACAT 54546
|||| | || | ||| || || | |||||| || | | ||| ||||| | |||
Sbjct 80120 TCTCTACGACTTTGGGTATGTC--ATCGCCATGAATACCAATGGAGACGCGCATGATCAT 80063
Query 54547 GTGCTGAGGTCTTTCAACGATCTTGTTG-TTTATTTTCAGCAAGTAGGATTTTTCCAAAG 54605
|||||||| | || || ||| | |||| ||||||||||||||| || | |
Sbjct 80062 ATGCTGAGGGCGCTCGT-GAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCG 80004
Query 54606 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTT 54665
|||| ||||||||||||||||| ||||| || || |||| || | |||||||| |
Sbjct 80003 TTTTGAAACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCT 79944
Query 54666 TATCCTTATATTTGTTAACTACATCCATGGTAATACTT-----GAAATAATCGGAGAATG 54720
|| || || | || || || || |||| | ||||| || ||||||||
Sbjct 79943 CTTCAGCATGCTTCTGGACAACGTC----GT-ATACCTCTTGGGAAATCATTGGAGAATG 79889
Query 54721 TTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGttt 54780
|| |||| |||||| |||||| || | ||||| || || | || || | |||
Sbjct 79888 CTTGTCATTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTT 79829
Query 54781 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGG 54840
|||||| | |||||| ||||| || || || |||| || || || |||||| || ||
Sbjct 79828 TTTTGTCTGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGG 79769
Query 54841 ATG 54843
||
Sbjct 79768 GTG 79766
Score = 93.3 bits (102), Expect = 5e-14
Identities = 147/207 (71%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867
||||||||||| || || || |||| || || || ||||||||||| || || || ||
Sbjct 81816 GTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGC 81757
Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTG--GAATAACTCGGATCTGCTA 52925
|| | ||| ||||| || |||||||| || || ||| | | |||| ||| |
Sbjct 81756 CCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGAT-TGC-A 81699
Query 52926 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 52985
||| ||| |||| | |||||||| |||||||| | ||| ||| | || ||||| | |
Sbjct 81698 TATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGA 81639
Query 52986 TGATCGTCTTTTGTGGAATTTCCCAAA 53012
| ||| |||||| || |||||||
Sbjct 81638 TAATCACCTTTTGACTGATCTCCCAAA 81612
>seq285
Length=150650
Score = 165 bits (182), Expect = 1e-35
Identities = 582/902 (65%), Gaps = 24/902 (3%)
Strand=Plus/Plus
Query 23859 ACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGGAT 23918
|||||||| || || ||||| || || || | | || || || ||||| || || |
Sbjct 138790 ACACGTTTCTCAAAGAAATTGGTCTTTCCAGCAAGAGAGATGTTCTCCATAAAGTCAAAC 138849
Query 23919 GGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCAATCTATCTGCGACA 23978
|||||||| ||||| |||| | || ||||| | | | ||| | || |||||
Sbjct 138850 GGATTGGTCACATTGTAGACGCGCTTGTGGCCCAAAGCCAACAGCAAACGGTCGGCGACG 138909
Query 23979 AACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCC 24038
||||| | |||| ||||| | || ||||| || | ||| | || || | |||
Sbjct 138910 AACTCGACATATTGGTTCATGAGGTCGGCGTTCATGCCGAGAAGACTTACAGGCAAAGCA 138969
Query 24039 ACA-GTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTC 24097
| | ||| | |||||| ||||| ||| || || || || || ||| | | |
Sbjct 138970 TCGCGGAAGTA-TTCTTGCTCAATGTCGACGGCTTCAGTGATGATTC-TCTCAACGATAG 139027
Query 24098 TTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGAC 24156
| || || | | | || || | || | | ||| || |||||| ||| | ||
Sbjct 139028 CACGGCTAGGGCGGTTCTGCAAGTGGCTGAATAGGAGACAGGCAAAATCGGTGTGCATAC 139087
Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216
|||| || | ||| | ||||||||| || || || || ||||| || ||||||||||
Sbjct 139088 CCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAGCCCAGGCATGAGCCCACGCTTTT 139147
Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276
| ||||| || || || ||||| || ||| ||||| | ||||| || || || ||||
Sbjct 139148 TCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAAGACACCTTCAACAGCAGCGAAGG 139207
Query 24277 CAATAAGTCTTTCTCCATA---------ACCGGCGCTGTCATGTATCCACTTTTGAGCCC 24327
|||| || | ||| | | | || ||||| ||||| | ||||
Sbjct 139208 CAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCTG------ATCCAACGAAGTGCCC 139261
Query 24328 AATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttttt 24387
| | |||||||| | | || || || || || || || ||| ||| |
Sbjct 139262 ACTTAGCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTTGAACAGAAAGTCGGCCT 139321
Query 24388 CATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTT 24447
| ||||| ||||| || ||||||||||||| |||| ||| | || || ||||||||||
Sbjct 139322 CTTTACTGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGTCTCAGAGTGAATGTTTT 139381
Query 24448 CAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAA 24507
| || || || || |||||||||||| | ||||||| ||| || || || |
Sbjct 139382 CCATCATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAATACCAACCTCACCACTGA 139441
Query 24508 ATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 24567
|||| || | | ||| ||||| || || || ||||| || ||||| || || | |||
Sbjct 139442 ATCGCTCAACGAGATTCTCATTGACAATGCCATCACTAGCAGCAAAGAAAGCAAGAACAC 139501
Query 24568 GTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTT---ATTCCAATCATTGATATCTTTA 24623
| | ||| ||| | ||||| | || | || || | ||| || | | || |||
Sbjct 139502 GGGACACAAAGTATCTCTCGTCATCGT-TCAGCTTGTGCTCCCAGTCGTGAGTGTCCTTA 139560
Query 24624 GATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAG 24683
|| || | ||| || | ||||||||||| ||||| || || || || | |||
Sbjct 139561 CCTAGGTCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTTCTTGTAAGCCTGCCAA 139620
Query 24684 ATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATTGGT 24743
|| | || | || || || | |||||| | |||||||||| |||||| ||
Sbjct 139621 ATCGAGTTGTACTTGATCGGGAACAAAACAAACCGGTTTGGATTTTCCTGAAGGATGGGC 139680
Query 24744 TC 24745
||
Sbjct 139681 TC 139682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593719410651600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |