Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq274 118 9e-22 seq212 100 2e-16 seq277 84.2 2e-11 >seq274 Length=107525 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | |||||||| || ||||||||||| ||| | ||||| ||| || Sbjct 41930 CACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCATC 41989 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||| ||||||||||| || || || ||||||||||| || | Sbjct 41990 AAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCGCT 42049 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || |||| |||||| | ||| ||||||| ||| | || || Sbjct 42050 GATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTCTT 42109 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| ||||| | || |||||||| Sbjct 42110 ACCCGTCAGGGTTTTAATGAAGATCTGCAT 42139 >seq212 Length=31356 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| || ||||| || || |||||||| || | ||||| ||| || Sbjct 28261 CACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCGTC 28202 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||| ||||||||||| || || || ||||| |||||||| | Sbjct 28201 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCGCT 28142 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || |||| ||||| | ||||||||| | ||| | || || Sbjct 28141 GATCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGTCTT 28082 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || | || |||||||| Sbjct 28081 CCCCGTGAGGGTCTTGATGAAGATCTGCAT 28052 >seq277 Length=119773 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/209 (69%), Gaps = 9/209 (4%) Strand=Plus/Minus Query 134127 TTTACGCGTTTCATGAATAGATCGGGAATCCACAGGCCGAGCATTAAATCGCGAGCTTTA 134186 || ||||| |||||||| |||||||||||||| ||| | | | | |||||| || | Sbjct 80583 TTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATCGCGTGCGCGA 80524 Query 134187 GTGTCTTCGGAGCC---CATGTTGCGTCTCAAGTTGAGAAACTCATAAATTTCCGGATGC 134243 | ||||| ||| | ||||| || || || ||| || | | || |||| Sbjct 80523 ATCTCTTCCTTGCCGTGATTTTTGCG---CAGGTCGATAAAGTCGAACACATCGTCATGC 80467 Query 134244 CACGGCTCGATGTAGGCGGCGAGGGCACCTTTTCGC---TTACCACCCTGGTCGACGTGA 134300 |||||||||| |||| ||| | |||||| ||| || ||||| |||||||||| | Sbjct 80466 CACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTCGACGTAA 80407 Query 134301 CGCACCATGTTGTTGAAGACTCTCAACAT 134329 || | |||||||| | || | |||||| Sbjct 80406 CGAGCAGTGTTGTTGTACACACGCAACAT 80378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828840244140