Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq274 118 9e-22
seq212 100 2e-16
seq277 84.2 2e-11
>seq274
Length=107525
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | |||||||| || ||||||||||| ||| | ||||| ||| ||
Sbjct 41930 CACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCATC 41989
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| ||||||||||| || || || ||||||||||| || |
Sbjct 41990 AAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCGCT 42049
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || |||| |||||| | ||| ||||||| ||| | || ||
Sbjct 42050 GATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTCTT 42109
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| ||||| | || ||||||||
Sbjct 42110 ACCCGTCAGGGTTTTAATGAAGATCTGCAT 42139
>seq212
Length=31356
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| || ||||| || || |||||||| || | ||||| ||| ||
Sbjct 28261 CACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCGTC 28202
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || ||| |||| ||||||||||| || || || ||||| |||||||| |
Sbjct 28201 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCGCT 28142
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || |||| ||||| | ||||||||| | ||| | || ||
Sbjct 28141 GATCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGTCTT 28082
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || | || ||||||||
Sbjct 28081 CCCCGTGAGGGTCTTGATGAAGATCTGCAT 28052
>seq277
Length=119773
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/209 (69%), Gaps = 9/209 (4%)
Strand=Plus/Minus
Query 134127 TTTACGCGTTTCATGAATAGATCGGGAATCCACAGGCCGAGCATTAAATCGCGAGCTTTA 134186
|| ||||| |||||||| |||||||||||||| ||| | | | | |||||| || |
Sbjct 80583 TTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATCGCGTGCGCGA 80524
Query 134187 GTGTCTTCGGAGCC---CATGTTGCGTCTCAAGTTGAGAAACTCATAAATTTCCGGATGC 134243
| ||||| ||| | ||||| || || || ||| || | | || ||||
Sbjct 80523 ATCTCTTCCTTGCCGTGATTTTTGCG---CAGGTCGATAAAGTCGAACACATCGTCATGC 80467
Query 134244 CACGGCTCGATGTAGGCGGCGAGGGCACCTTTTCGC---TTACCACCCTGGTCGACGTGA 134300
|||||||||| |||| ||| | |||||| ||| || ||||| |||||||||| |
Sbjct 80466 CACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTCGACGTAA 80407
Query 134301 CGCACCATGTTGTTGAAGACTCTCAACAT 134329
|| | |||||||| | || | ||||||
Sbjct 80406 CGAGCAGTGTTGTTGTACACACGCAACAT 80378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433828840244140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |