Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq289 86.0 5e-12
>seq289
Length=181150
Score = 86.0 bits (94), Expect = 5e-12
Identities = 286/446 (64%), Gaps = 23/446 (5%)
Strand=Plus/Minus
Query 20215 GAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTT 20274
||||| || ||||| || || |||||||| || ||| | |||||||| || || ||| |
Sbjct 143131 GAGGGCGACTTGGGACCGGTTTATGGATTCCAGTGGCGCCATTTTGGTGCAGAGTATCGT 143072
Query 20275 GACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTA 20334
| | | || | ||| || |||| || || || || | | || ||||| |
Sbjct 143071 GGCTGCGATGCAGACTATACAGGTGAAGGTGTTGACCAGTTGAATGAGGTGATTAAGCTT 143012
Query 20335 ATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTG 20394
|| |||| |||| || |||||||||||||||| || ||||| | || | |
Sbjct 143011 ATAAAAAGTGACCCCTACTCGAGAAGAATTATTTTATCTGCGTGGAATCCCGCAGCCGAG 142952
Query 20395 CCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAAT----AA 20450
| ||| |||||| | || ||||| || || | | |||||||||||| | ||| ||
Sbjct 142951 CGTTTTATGGCTCTTCCGCCATGCCACATATTGAGTCAATTTTACGTTTC-AATGCCGAA 142893
Query 20451 TG---------------AAT---TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGG 20492
| ||| | ||||| ||||||||||| | ||||||||
Sbjct 142892 AGGTGAGCAAGGCCCAAAATACCTCAACTGTCAGATGTATCAACGTAGTGGAGATATGGG 142833
Query 20493 ACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGT 20552
|| || ||||| ||||| |||||| || || | | || | |||||||| || ||
Sbjct 142832 CCTTGGAGTTCCCTTCAACATTGCATCCTACGCATTATTGACTAAAATGATTGCGCACGT 142773
Query 20553 TACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAA 20612
|| | || |||| ||| |||| | | || ||||| ||| | ||| ||
Sbjct 142772 CACCGGCTTGCTCCCGGGAACCTTCATCCATGCACTGGGTGACGCTCATGTCTACGCCAA 142713
Query 20613 TCATATAGAACCTTTAAAATTACAGT 20638
|| | |||||||| ||| ||||||
Sbjct 142712 CCACGTTGAACCTTTGAAAATACAGT 142687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399182564808775
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |