Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq289 86.0 5e-12 >seq289 Length=181150 Score = 86.0 bits (94), Expect = 5e-12 Identities = 286/446 (64%), Gaps = 23/446 (5%) Strand=Plus/Minus Query 20215 GAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTT 20274 ||||| || ||||| || || |||||||| || ||| | |||||||| || || ||| | Sbjct 143131 GAGGGCGACTTGGGACCGGTTTATGGATTCCAGTGGCGCCATTTTGGTGCAGAGTATCGT 143072 Query 20275 GACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTA 20334 | | | || | ||| || |||| || || || || | | || ||||| | Sbjct 143071 GGCTGCGATGCAGACTATACAGGTGAAGGTGTTGACCAGTTGAATGAGGTGATTAAGCTT 143012 Query 20335 ATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTG 20394 || |||| |||| || |||||||||||||||| || ||||| | || | | Sbjct 143011 ATAAAAAGTGACCCCTACTCGAGAAGAATTATTTTATCTGCGTGGAATCCCGCAGCCGAG 142952 Query 20395 CCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAAT----AA 20450 | ||| |||||| | || ||||| || || | | |||||||||||| | ||| || Sbjct 142951 CGTTTTATGGCTCTTCCGCCATGCCACATATTGAGTCAATTTTACGTTTC-AATGCCGAA 142893 Query 20451 TG---------------AAT---TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGG 20492 | ||| | ||||| ||||||||||| | |||||||| Sbjct 142892 AGGTGAGCAAGGCCCAAAATACCTCAACTGTCAGATGTATCAACGTAGTGGAGATATGGG 142833 Query 20493 ACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGT 20552 || || ||||| ||||| |||||| || || | | || | |||||||| || || Sbjct 142832 CCTTGGAGTTCCCTTCAACATTGCATCCTACGCATTATTGACTAAAATGATTGCGCACGT 142773 Query 20553 TACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAA 20612 || | || |||| ||| |||| | | || ||||| ||| | ||| || Sbjct 142772 CACCGGCTTGCTCCCGGGAACCTTCATCCATGCACTGGGTGACGCTCATGTCTACGCCAA 142713 Query 20613 TCATATAGAACCTTTAAAATTACAGT 20638 || | |||||||| ||| |||||| Sbjct 142712 CCACGTTGAACCTTTGAAAATACAGT 142687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399182564808775