Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq277 91.5 3e-13 seq295 86.0 1e-11 >seq277 Length=119773 Score = 91.5 bits (100), Expect = 3e-13 Identities = 156/220 (71%), Gaps = 10/220 (5%) Strand=Plus/Minus Query 94408 TCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCAC 94467 ||||| |||||||| | |||| ||| || || || | ||||| | |||||||||||| Sbjct 80679 TCATACTTCTCGTAAAGAGCCTCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCAT 80620 Query 94468 TCGTGGGGGCACATCAGGGACCAAT--TCTTCCCAGCCTTCACTCTCTCCATGAAGAGAT 94525 |||| ||||||||| || | ||||| | ||| || || || | || |||||| |||| Sbjct 80619 TCGTTGGGGCACATAAGTGTCCAATCAGCATCC--GCTTTGACGCGCTTCATGAACAGAT 80562 Query 94526 CAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAA--TCTTCATTACCGGCATT 94583 | | | ||| | || |||||||| | ||| | | || ||||| || ||| ||| Sbjct 80561 CGGGAATCCAAAGGGCCATGAAAAGAT--CGCGTGCGCGAATCTCTTCCTTGCCGTGATT 80504 Query 94584 CTTTCTGCA-GTCAATAAAGTCCTTCACGTCCAGATGCCA 94622 ||| ||| ||| |||||||| ||| || |||||| Sbjct 80503 -TTTGCGCAGGTCGATAAAGTCGAACACATCGTCATGCCA 80465 >seq295 Length=432776 Score = 86.0 bits (94), Expect = 1e-11 Identities = 99/131 (76%), Gaps = 8/131 (6%) Strand=Plus/Minus Query 94191 AGCCAAATTGCACACTGCAGTTTC---CTCCGAATCACTGTACTGGACAATTTCAGTGCA 94247 ||| | ||||||||| ||||| || ||||||| | |||| || ||||| ||||| Sbjct 224757 AGCGAGATTGCACACGGCAGTCTCGCTCTCCGAAGAA---TACTCTACTATTTCGGTGCA 224701 Query 94248 CAAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGATGGTATC 94307 || ||||||||| ||||| |||| | ||| | ||||||||||| |||||| || ||| Sbjct 224700 CAGATTTGAAGATTTGATTGTGCCTAGATTCTTCTGGTTAGACTTGCTATTGCAGGCATC 224641 Query 94308 CT--TAAAGCA 94316 | ||||||| Sbjct 224640 TTTGTAAAGCA 224630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989580259681725