Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq277 214 2e-50
seq285 188 9e-43
>seq277
Length=119773
Score = 214 bits (236), Expect = 2e-50
Identities = 724/1112 (65%), Gaps = 28/1112 (3%)
Strand=Plus/Minus
Query 63020 CTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 63079
|||||| ||||| | ||| | || || ||||| ||| |||||||| || || ||
Sbjct 80827 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 80768
Query 63080 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCT 63138
||| || ||||||| || |||||| || | ||| || | ||| | | || ||||||
Sbjct 80767 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAA-GCTTCTGAGCCT 80709
Query 63139 TTATTATA-GATTTGTATCTCCTTTCTCTTTCGTA--TAGAGTATACAATCGTTCGAACT 63195
|||| || || | ||| || |||| || | ||| | | | || || |
Sbjct 80708 TTATGGTACGACGGCCCTTTCCAGCCT-TTTCATACTTCTCGTAAAGAGCC--TCAAATT 80652
Query 63196 CGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTC 63255
| ||||| |||| | | | | ||| ||||| | || ||||| | | ||| ||
Sbjct 80651 CATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATCAG 80592
Query 63256 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63315
| || | || || || ||||| || ||||| ||||||||||| || || || ||||| |
Sbjct 80591 CATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATCGC 80532
Query 63316 TTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 63375
|| | | || || || || ||| || || |||| || | | | |||
Sbjct 80531 GTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATCGT 80472
Query 63376 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63435
||||||||| || | ||| ||||| | | ||||| || ||||| || || || || |
Sbjct 80471 CATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTCGA 80412
Query 63436 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCAT 63495
||| | ||| ||||| || || || | |||||| |||| ||| || || || | || |
Sbjct 80411 CGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCCGT 80352
Query 63496 TGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA--CTAATTGATAGACCTATTCC 63553
| ||||| | ||||| ||| | || || || ||| | | ||| | || || ||
Sbjct 80351 TCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGA--GCCCAATCCC 80294
Query 63554 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCT 63613
|| || || ||||| | ||||| | || | || || || || || || ||
Sbjct 80293 ACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTCAATAGA 80234
Query 63614 ATCATCGATCATGTTAAGTAGAAAACAGCTAGA-CATTTGGTGACGAGTAGTTCCCGCAT 63672
||| || ||||||| | || || || | || ||| || | | |||||| ||||
Sbjct 80233 ATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTCCTGCAT 80175
Query 63673 TAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAA 63732
| | ||||| || || ||||| || || |||| | || | || ||||| ||||| |
Sbjct 80174 TGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAGTCTCTA 80115
Query 63733 TAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63790
|| | ||| || || | |||||| || | | ||| ||||| | ||| |||||
Sbjct 80114 CGACTTTGGGTATGTC--ATCGCCATGAATACCAATGGAGACGCGCATGATCATATGCTG 80057
Query 63791 AGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 63850
||| | || || ||| |||| ||||| ||||||||| || | ||||| ||
Sbjct 80056 AGGGCGCTCGTGAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCGTTTTGAA 79997
Query 63851 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTT 63910
||||||||||||||| ||||| || || |||| || | || ||||||| ||
Sbjct 79996 ACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCTCTTCAGC 79937
Query 63911 ATATTTGTTAACTATATCCATGGTAATACTT-----GAAATAATCGGAGAATGTTTCCCA 63965
|| || | || | | | || |||| | ||||| || |||||||| || ||
Sbjct 79936 ATGCTTCTGGACAA----CGTCGT-ATACCTCTTGGGAAATCATTGGAGAATGCTTGTCA 79882
Query 63966 TTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTT 64025
|| |||||| |||||| ||| | |||||| || || | || || | |||||||||
Sbjct 79881 TTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTTTTTTGTC 79822
Query 64026 TCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGT 64085
| ||||| ||||| || | || |||| || || || |||||| || || ||
Sbjct 79821 TGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGGGTGGACC 79762
Query 64086 GTAGTACAAGTGGCTGCTATTTCGGCTGCCAG 64117
||||| | || ||| | ||||| |||||
Sbjct 79761 GTAGTCATTGACGCAGCTGTCTCGGCAGCCAG 79730
Score = 98.7 bits (108), Expect = 1e-15
Identities = 148/207 (71%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||||||||| || || || |||| || || || ||||||||||| || || || ||
Sbjct 81816 GTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGC 81757
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG--GAATAACTCGGATCTGCTA 62163
|| | ||| ||||| || ||||||||||| || ||| | | |||| ||| |
Sbjct 81756 CCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGAT-TGC-A 81699
Query 62164 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62223
||| ||| |||| | |||||||| |||||||| | ||| ||| | || ||||| | |
Sbjct 81698 TATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGA 81639
Query 62224 TGATCGTCTTTTGTGCAATTTCCCAAA 62250
| ||| |||||| || |||||||
Sbjct 81638 TAATCACCTTTTGACTGATCTCCCAAA 81612
>seq285
Length=150650
Score = 188 bits (208), Expect = 9e-43
Identities = 577/885 (65%), Gaps = 24/885 (3%)
Strand=Plus/Plus
Query 33306 ACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAAC 33365
|||||||| || || ||||| || ||||| | | || || || ||||| || ||||||
Sbjct 138790 ACACGTTTCTCAAAGAAATTGGTCTTTCCAGCAAGAGAGATGTTCTCCATAAAGTCAAAC 138849
Query 33366 GGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACG 33425
|||||||| |||||||| | || ||||| | | | ||| | || ||||||
Sbjct 138850 GGATTGGTCACATTGTAGACGCGCTTGTGGCCCAAAGCCAACAGCAAACGGTCGGCGACG 138909
Query 33426 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCC 33485
|| || | |||| ||||| | || ||||| || | || | || || | |||
Sbjct 138910 AACTCGACATATTGGTTCATGAGGTCGGCGTTCATGCCGAGAAGACTTACAGGCAAAGCA 138969
Query 33486 ACA-GTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAATCT-AACGGTTT 33543
| | ||| | |||||| |||||| || || | || || || ||| |||| |
Sbjct 138970 TCGCGGAAGTA-TTCTTGCTCAATGTCGACGGCTTCAGTGATGATTC-TCTCAACGATAG 139027
Query 33544 CTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGAC 33603
| || || | | || || | || | | ||| || |||||| ||||| ||
Sbjct 139028 CACGGCTAGGGCGGTTCTGCAAGTGGCTGAATAGGAGACAGGCAAAATCGGTGTGCATAC 139087
Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663
|||| || | ||| | |||||| || || || || || ||||| || ||||||||||
Sbjct 139088 CCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAGCCCAGGCATGAGCCCACGCTTTT 139147
Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723
| ||||| || || || || || || || ||||||| ||||| || ||||| ||||
Sbjct 139148 TCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAAGACACCTTCAACAGCAGCGAAGG 139207
Query 33724 CAATAAGTCTCTCTCCATA---------ACCGGCGCTGTCATGTATCCACTTTTGAGCCC 33774
|||| || | |||| | | | || ||||| ||||| | ||||
Sbjct 139208 CAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCTG------ATCCAACGAAGTGCCC 139261
Query 33775 AATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttttt 33834
| | |||||||| | | || || || ||||| || || ||| ||| |
Sbjct 139262 ACTTAGCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTTGAACAGAAAGTCGGCCT 139321
Query 33835 CATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTT 33894
| ||||| ||||| || || ||||| |||| |||| ||| | || || ||||||||||
Sbjct 139322 CTTTACTGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGTCTCAGAGTGAATGTTTT 139381
Query 33895 CAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAA 33954
| || ||||| || |||||||||||| | ||||||| ||| || || || |
Sbjct 139382 CCATCATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAATACCAACCTCACCACTGA 139441
Query 33955 ATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACAT 34014
|||| || | | ||| ||||| || || |||||||| || ||||| || || | |||
Sbjct 139442 ATCGCTCAACGAGATTCTCATTGACAATGCCATCACTAGCAGCAAAGAAAGCAAGAACAC 139501
Query 34015 GTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTT---ATTCCAATCATTGATATCTTTA 34070
| | ||| ||| | ||||| | || | || || | ||| || | | || |||
Sbjct 139502 GGGACACAAAGTATCTCTCGTCATCGT-TCAGCTTGTGCTCCCAGTCGTGAGTGTCCTTA 139560
Query 34071 GATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAG 34130
|| || | ||| || | ||||||||||| ||||| || || || || | |||
Sbjct 139561 CCTAGGTCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTTCTTGTAAGCCTGCCAA 139620
Query 34131 ATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 34175
|| | || | ||| ||||| | |||||| | |||||||||
Sbjct 139621 ATCGAGTTGTACTTGATCGGGAACAAAACAAACCGGTTTGGATTT 139665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629815277547600
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