Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq277 244 2e-59 seq285 194 2e-44 >seq277 Length=119773 Score = 244 bits (270), Expect = 2e-59 Identities = 734/1113 (66%), Gaps = 30/1113 (3%) Strand=Plus/Minus Query 79692 CTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 79751 ||| |||||||| | ||| | || || ||||| ||| |||||||| || || || Sbjct 80827 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 80768 Query 79752 GAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCT 79810 ||| || ||||||| || |||||| || | ||| || | ||| | | || |||||| Sbjct 80767 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAA-GCTTCTGAGCCT 80709 Query 79811 TTATTATA-GACTTGTATCTCTTTTCTCTTTCGTA-TTGT-GTATATAATCGTTCGAACT 79867 |||| || ||| | || || |||| || || | ||| | | | || || | Sbjct 80708 TTATGGTACGACGGCCCTTTCCAGCCT-TTTCATACTTCTCGTAAAGAGCC--TCAAATT 80652 Query 79868 CGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTC 79927 | ||||| |||| || | | ||||| ||||||| || ||||| | | ||| || Sbjct 80651 CATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATCAG 80592 Query 79928 CATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 79987 |||| | || || || ||||| || ||||| ||||||||||| || || || ||||| | Sbjct 80591 CATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATCGC 80532 Query 79988 TGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 80047 | | | ||| || || || ||| || || |||| || | | | ||| Sbjct 80531 GTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATCGT 80472 Query 80048 AATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTA 80107 ||||||||| || | ||| ||||| | | || || || ||||| || || || || | Sbjct 80471 CATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTCGA 80412 Query 80108 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCAT 80167 ||| | ||| ||||| || || || | |||||| |||| ||| ||||| || || || | Sbjct 80411 CGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCCGT 80352 Query 80168 TGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA--CTAATTGATAGACCTATTCC 80225 | || || | ||||| ||| | || || || ||| | | || || || || || Sbjct 80351 TCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTG--AGCCCAATCCC 80294 Query 80226 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCT 80285 || || || ||||| | ||||| | || | ||||| || || ||||| || Sbjct 80293 ACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTCAATAGA 80234 Query 80286 ATCATCAATCATGTTAAGTAGAAAACAGCTAG-ACATTTGGTGACGACTAGTTCCCGCAT 80344 ||| || ||||||| | || || || | || ||| || | |||||| |||| Sbjct 80233 ATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTCCTGCAT 80175 Query 80345 TAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAA 80404 | | ||||| || || ||||| || || |||| | |||| || ||||| ||||| | Sbjct 80174 TGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAGTCTCTA 80115 Query 80405 TAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAACATGTGCTG 80462 || || ||| ||| | |||||| || | | ||| ||||| | ||| ||||| Sbjct 80114 CGACT--TTGGGTATGTCATCGCCATGAATACCAATGGAGACGCGCATGATCATATGCTG 80057 Query 80463 AGGTCTTTCAACGATCTTGT-TATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAA 80521 ||| | || || ||| | ||||| ||||| |||||| || || | ||||| | Sbjct 80056 AGGGCGCTC-GTGAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCGTTTTGA 79998 Query 80522 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCT 80581 |||||||||||||||| ||||| || || |||| || | |||||||| | || Sbjct 79997 AACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCTCTTCAG 79938 Query 80582 TATATTTGTTAACTACATCCATGGTGATACTT-----GAAATAATCGGAGAATGTTTCCC 80636 || || | || || || || |||| | ||||| || |||||||| || | Sbjct 79937 CATGCTTCTGGACAACGTC----GT-ATACCTCTTGGGAAATCATTGGAGAATGCTTGTC 79883 Query 80637 ATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGT 80696 ||| |||||| |||||| ||| | |||||| || || | || || | ||||||||| Sbjct 79882 ATTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTTTTTTGT 79823 Query 80697 TTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTG 80756 | ||||| ||||| || || || |||| || || | |||||| || || || Sbjct 79822 CTGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGGGTGGAC 79763 Query 80757 TGTAGTACAAGTGGCTGCTATTTCGGCTGCCAG 80789 ||||| | || ||| | ||||| ||||| Sbjct 79762 CGTAGTCATTGACGCAGCTGTCTCGGCAGCCAG 79730 Score = 102 bits (112), Expect = 1e-16 Identities = 149/207 (72%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||||||||| || || || |||| || || || ||||||||||| || || || || Sbjct 81816 GTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGC 81757 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTG--GAATAACTCGGATCTGCTA 78835 || | ||| |||||||| ||||||||||| || ||| | | |||| ||| | Sbjct 81756 CCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGAT-TGC-A 81699 Query 78836 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 78895 ||| ||| |||| | |||||||| |||||||| | ||| ||| | || ||||| | | Sbjct 81698 TATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGA 81639 Query 78896 TGATCGTCTTTTGTGGAATTTCCCAAA 78922 | ||| |||||| || ||||||| Sbjct 81638 TAATCACCTTTTGACTGATCTCCCAAA 81612 >seq285 Length=150650 Score = 194 bits (214), Expect = 2e-44 Identities = 575/879 (65%), Gaps = 12/879 (1%) Strand=Plus/Plus Query 49684 ACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAAC 49743 |||||||| || || ||||| || ||||| | | || || || ||||| || |||||| Sbjct 138790 ACACGTTTCTCAAAGAAATTGGTCTTTCCAGCAAGAGAGATGTTCTCCATAAAGTCAAAC 138849 Query 49744 GGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACA 49803 |||||||| ||||| || | || ||||| | | | ||| | || ||||| Sbjct 138850 GGATTGGTCACATTGTAGACGCGCTTGTGGCCCAAAGCCAACAGCAAACGGTCGGCGACG 138909 Query 49804 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGC- 49862 || || | |||| ||||| | || ||||| || | ||| | || || | ||| Sbjct 138910 AACTCGACATATTGGTTCATGAGGTCGGCGTTCATGCCGAGAAGACTTACAGGCAAAGCA 138969 Query 49863 -CGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCT-AACGGTT 49920 ||| | ||| | |||||| |||||| || || || || || || ||| |||| | Sbjct 138970 TCGCGG-AAGTA-TTCTTGCTCAATGTCGACGGCTTCAGTGATGATTC-TCTCAACGATA 139026 Query 49921 TCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGA 49980 | || || | | | || || | || | | ||| || |||||| ||||| | Sbjct 139027 GCACGGCTAGGGCGGTTCTGCAAGTGGCTGAATAGGAGACAGGCAAAATCGGTGTGCATA 139086 Query 49981 CCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 50040 ||||| || | ||| ||||||||||| || || || || ||||| || ||||||||| Sbjct 139087 CCCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAGCCCAGGCATGAGCCCACGCTTT 139146 Query 50041 TTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAG 50100 || ||||| || || || ||||| || ||| ||||||| ||||| || || || ||| Sbjct 139147 TTCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAAGACACCTTCAACAGCAGCGAAG 139206 Query 50101 GCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCG 50157 |||| || | |||| | | | | | ||| ||||| | ||||| | Sbjct 139207 GCAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCTGATCCAACGAAGTGCCCACTTA 139266 Query 50158 GCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTA 50217 |||||||| | | || || || ||||| || || ||| ||| || ||| Sbjct 139267 GCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTTGAACAGAAAGTCGGCCTCTTTA 139326 Query 50218 CTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATG 50277 || ||||| || || ||||| |||| |||| ||| | || || ||||||||||| || Sbjct 139327 CTGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGTCTCAGAGTGAATGTTTTCCATC 139386 Query 50278 GCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGT 50337 ||||| || |||||||||||| | ||||||| ||| || || || ||||| Sbjct 139387 ATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAATACCAACCTCACCACTGAATCGC 139446 Query 50338 TCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTT 50397 ||| | | ||| ||||| || || || ||||| || ||||| || || | ||| | Sbjct 139447 TCAACGAGATTCTCATTGACAATGCCATCACTAGCAGCAAAGAAAGCAAGAACACGGGAC 139506 Query 50398 ATAAAATGTTTTTCGTTGGGTGTTAGTTT---ATTCCAATCATTGATATCTTTAGATATA 50454 | ||| | | | |||| | || || | ||| || | | || ||| || Sbjct 139507 ACAAAGTATCTCTCGTCATCGTTCAGCTTGTGCTCCCAGTCGTGAGTGTCCTTACCTAGG 139566 Query 50455 TCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCA 50514 || | ||| || | ||||||||||| ||||| || || || || | ||| || Sbjct 139567 TCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTTCTTGTAAGCCTGCCAAATCGAG 139626 Query 50515 TGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553 | || | ||| ||||| | |||||| | ||||||||| Sbjct 139627 TTGTACTTGATCGGGAACAAAACAAACCGGTTTGGATTT 139665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266151383800