Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq274 102 2e-16
>seq274
Length=107525
Score = 102 bits (112), Expect = 2e-16
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || |||||||| || ||||| || || || | || || || || || || ||
Sbjct 41943 GTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCATCAAGCTGCTTGCCG 42002
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC-CTGAATCTTTGCTTT 104481
|| || || || | ||| || ||||| || || || || ||||| |||| |||| ||| |
Sbjct 42003 GCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCGCTGA-TCTT-GCTCT 42060
Query 104482 T-ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540
| ||| || | ||| || || | || ||||| || |||||||||||||| || || |
Sbjct 42061 TCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTCTTACCCGTCAGGG 42120
Query 104541 TTTTTACAAATATCTGCAT 104559
|||| | || ||||||||
Sbjct 42121 TTTTAATGAAGATCTGCAT 42139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151394048073860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |