Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq274 102 2e-16 >seq274 Length=107525 Score = 102 bits (112), Expect = 2e-16 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || |||||||| || ||||| || || || | || || || || || || || Sbjct 41943 GTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCATCAAGCTGCTTGCCG 42002 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC-CTGAATCTTTGCTTT 104481 || || || || | ||| || ||||| || || || || ||||| |||| |||| ||| | Sbjct 42003 GCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCGCTGA-TCTT-GCTCT 42060 Query 104482 T-ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540 | ||| || | ||| || || | || ||||| || |||||||||||||| || || | Sbjct 42061 TCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTCTTACCCGTCAGGG 42120 Query 104541 TTTTTACAAATATCTGCAT 104559 |||| | || |||||||| Sbjct 42121 TTTTAATGAAGATCTGCAT 42139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151394048073860