Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq274 86.0 5e-12
>seq274
Length=107525
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCT 48575
||| || ||||| || |||||| ||||||||||| || | || || || | || |
Sbjct 41930 CACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA-AAGGGTGCGGCCATCAT 41988
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
| |||||||| ||| || | || | ||||||||| || ||| | | ||||| ||
Sbjct 41989 CAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCGC 42048
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
| || || ||| | || | | ||||| || | |||||| ||||| || || || |
Sbjct 42049 TGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTCT 42108
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCATCGT 48729
|||| || || ||||| | || |||||||||||
Sbjct 42109 TACCCGTCAGGGTTTTAATGAAGATCTGCATCGT 42142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421249685470295
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |