Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq288 87.8 2e-12
>seq288
Length=168972
Score = 87.8 bits (96), Expect = 2e-12
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 19356 TACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGA 19415
||||| | || || || |||||||| ||| | || || ||||| ||| || || |
Sbjct 48657 TACCTCAGATTGGAGACAAGTTTGCCTCTCGTCATGGACAGAAAGGTACAATAGGAATCA 48598
Query 19416 TTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTA 19475
|||||| || ||||||||||| ||||| || ||| | || || ||||| || ||||
Sbjct 48597 CTTATCGACATGAAGATATGCCATTTACCGCCGAGGGTCTTGTTCCCGATCTCATAATTA 48538
Query 19476 ACCCACATGCTTTTCCAAGTCGAATGAC 19503
|||| || || ||||| |||||||||
Sbjct 48537 ACCCGCACGCCATTCCATCTCGAATGAC 48510
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595869802722000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |