Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq274 131 2e-25
seq295 114 1e-20
seq212 113 4e-20
>seq274
Length=107525
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| || || | || |||||||| ||||||||||| |||
Sbjct 41913 CCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAA 41972
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || ||||||||||| ||| |||| | |||||||||||| || |||
Sbjct 41973 AGGGTGCGGCCATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGG 42032
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || ||| |||| || ||| | ||| | || || | ||||| |
Sbjct 42033 ATGCCCTCCTTATCGCTGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACC 42092
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||||| || ||||| || || ||||| | ||| ||||||||
Sbjct 42093 TCGAGGGTAATAGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCAT 42139
>seq295
Length=432776
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || || | ||| || || ||||| | || ||||||||||| |||||||| |||
Sbjct 305611 GCCGCCACGGAGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGA 305670
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || || || ||||||||||| || |||| | |||||| ||||| || ||
Sbjct 305671 AAGAGTACGACCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGG 305730
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|||||||| ||||| | ||| || ||||| ||| | || ||| | ||||| |
Sbjct 305731 AATTCCTTCCTTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTAC 305790
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| ||| || || |||| || || | ||||||||||||
Sbjct 305791 TTCTAGCGTAATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCAT 305838
>seq212
Length=31356
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || ||||| || || | || |||||||| || |||||||| ||
Sbjct 28278 CCACCACGAAGGCGAAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAG 28219
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || ||||||||||| ||| |||| | |||||||||||| || ||
Sbjct 28218 AGGGTGCGGCCATCGTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGA 28159
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| |||||| |||| || ||| | ||| | || ||| | |||||||
Sbjct 28158 ATGCCTTCCTTGTCGCTGATCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACC 28099
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || || || || || || | ||| ||||||||
Sbjct 28098 TCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGATGAAGATCTGCAT 28052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472011059452800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |